Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02498 ATGCACCTTACGTGGCCTATAAGAATGAAAATTGCAATTGGTGCTGCTAATGGCCTTGCATTTTTGCATGAGGAAGCTTCAAGGCTAGTAATATTTCGAGATTTCAAGACATCTAATATCCTATTGGATGAGAACTACAACGCAATACTTTCCGACTTTGGGCTTGCAAAAGATGCTCCAGTGGGAGATAAAAGTCATGTATCAACAGAAGTATTGGGAACTAAAGGCTATGCAGCCCCTGAGTATGTGAAGACAGATGACATTGCTAAGTCTCCTTGA 279 0.4086 MHLTWPIRMKIAIGAANGLAFLHEEASRLVIFRDFKTSNILLDENYNAILSDFGLAKDAPVGDKSHVSTEVLGTKGYAAPEYVKTDDIAKSP 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02498 92 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02498 92 Pfam Protein kinase domain 11 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02498 92 PANTHER OS01G0588500 PROTEIN-RELATED 3 87 - -
Pumo2g02498 92 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Pumo2g02498 92 SUPERFAMILY Protein kinase-like (PK-like) 3 86 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02498 Pumo-Chr2 54569437 54570344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02498 3 85 Glycoside Hydrolase AT3G07070 61.446 1.95e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo2g02498 Pkinase 1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02498 - - gmx:100820361 157.147