Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02459 ATGGCAGCTTTGGTAATAACTGTGTCACAAGACGGAACCGGACAGTACCGGACGGTGCAGGAAGCCATTGATGCTGTGCCACTCGGCAACACTCGCCGGATGGTGATTCGGGTGTCGCCGGGAACCTACCGGCAGCCCCTCTACGTGCCAAAGACCAAGAACTTCATCACCCTCGTTGGCTTGCGCCCCGAGGACACTGTTCTCACTTGGAACAACACTGCCACCTCAATCCACCACCACCAGGATGCTAGGGTGATAGGGACTGGAACCTTTGGTTGTGGCACCGCCATTGTGGAAGGGGGGGACTTTATTGCTGAGAATATTACCTTTGAGAATTCTTCCCCTCAGGGTGCAGGGCAAGCAGTGGCAGTTAGAGTAACAGCAGATCGTTGTGCTTTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACATTATGGAAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTAGACTTCATTTTTGGTAATAGTACTGCACTCTTGGAACATTGTCACATCCACTGCAAGACTGCAGGGTTCATAACTGCACAGAGCAGAAGCTCTCCACAGGAAAAAACTGGTTATGTATTCCTGAGATGTGTTGTCACAGGTAATGGGGGAATTTCATATGCATATCTGGGAAGACCATGGAGACCTTTTGCAAGAGTGGTCTTTGCATTCACTTTCATGGATCAATGTATAAAGCCTGCTGGCTGGAATGATTGGGGAAAAATTGAGAATGAAAGAACTGCTTGCTTCTATGAATACAGGTGTTTTGGACCGGGTTTCTATCCATCCCAACGAGTAAAATGGGCTAAAGAATTACAGGCTGAAGCAGCTGAGCAGTTTCTGATGCATAGCTTTATTGACCCAGAATCACAGAGACCTTGGCTTGCTCAAAGAATGGCCCTGAGGATTCCATATTCTGCTTAG 951 0.4711 MAALVITVSQDGTGQYRTVQEAIDAVPLGNTRRMVIRVSPGTYRQPLYVPKTKNFITLVGLRPEDTVLTWNNTATSIHHHQDARVIGTGTFGCGTAIVEGGDFIAENITFENSSPQGAGQAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKTAGFITAQSRSSPQEKTGYVFLRCVVTGNGGISYAYLGRPWRPFARVVFAFTFMDQCIKPAGWNDWGKIENERTACFYEYRCFGPGFYPSQRVKWAKELQAEAAEQFLMHSFIDPESQRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02459 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Pumo2g02459 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 304 - -
Pumo2g02459 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Pumo2g02459 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Pumo2g02459 316 Gene3D - 2 309 IPR012334 -
Pumo2g02459 316 FunFam Pectinesterase 2 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02459 Pumo-Chr2 53321975 53325251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02459 5 309 Carbohydrate Esterase AT5G47500 39.048 2.24e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02459 K01051 - gmx:100810259 635.565