Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02451 ATGGGTTGCATTAGCTCCAAGAATGCGGTTGCCGGAACTTGTTCTCCGTCGCCGGCGGTGCTGGACATTGCGGAGGCGGGTCCCACTTACAACAAGGGCCATTCCAGGTTGACGGCTTTGGAATCCAAAACGGGTTCAGAGGATGAGAGGAACAACAGCAAGTTCAAGAAGAACAATTCAAAGAAGAGTAGTGGGTCTTTCAGCTTCAGGCTTGGGTTGAATCAGAGGTATGTGGAGGCTGAACAGAATGCTGCTGGTTGGCCTCCATGGCTCACAGCTTCTGCAGCAGAAGCCATTCAAGGGTGGATCCCCCTCAAAGCCGATTCTTTCCAAAAGTTAGAAAAGATTGGACAAGGTACATATAGCAGTGTGTTCCGAGCTCGTGAAGTTGAAACTGGGAAGATGTTTGCTTTAAAGAAGGTGCGCTTTGACAATTTCCAACCAGAGAGCATTAGGTTCATGGCAAGAGAAATAACAATCCTCCGCAGGCTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCTCGCCTATCAAACAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGACTAGTGTCACGTCCTGATATTGTGTTCAGCGAATCACAGATAAAATGTTACATGAGGCAGCTATTAAGTGGACTTGAGCATTGTCATATGCGTGGTATCATGCATAGAGACATCAAAGTATCAAATATCTTGTTGAACAATGAAGGTGTTCTCAAGATAGCAGATTTTGGATTAGCAAATACAATTAGCACAAATAACAAGCATCATTTGACAAGTCGTGTTGTGACTCTGTGGTATCGCCCTCCTGAGCTCTTGATGGGATCAACCAACTATGGAGTATCAGTGGATCTGTGGAGTGTGGGCTGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTGAACAATTGCACAAAATTTTTAAGCTGTGTGGTTCTCCACCTGAGGAGTTCTGGAAAAAGACTAAGCTTCCTCATGCAACAATGTTTAAACCTCAGACTAATTATGAAAGCTCTCTCCGGGAGAGGTGTGCAGATTTCCCTGTATTTGCTGTAAATTTACTCGAGACTTTACTGTCGATTGATTCAAGCAACCGGGGGACTGCCTCATCTGCCCTAATGTCTGAGTATTTCAACATCAAGCCATACGCTTGTAGCCCATTAAGCTTGCCAAAGTATCCACCTAGCAAAGAAATGGATGTCAAAAGTATGGAAGATTCATCCAGGAAAAAGACTGGAGGTAAAATGAGAGAGGTTGCAACATCAAGAAGGCAACAAAGACGAGTCGGTAAAATTTTGCAAGATCCAAACAATTTCAGCAAATTAACTTCAAAAGAGAACATGCCTCAAAATGCTCGTAGAGATGATGGGAAAGCACATCTTACAAAGGGAAAAGGAGGAGCCATGCACAAAGATTATACAAAGCCTCATTTGGATGCCATGTCTGAGACTTCCCAAATGAATGTTGCTAATGGTAATGGCTATAGTGTGGGATCTAATAATGCCTTTGCATGGGGAAAAAGGAGAAAACAAGATGCATCTTCAACTCTATCAGATGGATCAAGAAGCAAAATTAGTGCACTGGATCCGAACTTTGCAAAAGGCACATATGACTTAACCAACCAAAGGGTGACCATGGATTTTGACCCCGCAGAACTGATGAATGCTCAGGGCGACAGAGGGCGTGCTGCAGTACGTAAATCAAGGTTTGGAAGAGACAGATGA 1773 0.4377 MGCISSKNAVAGTCSPSPAVLDIAEAGPTYNKGHSRLTALESKTGSEDERNNSKFKKNNSKKSSGSFSFRLGLNQRYVEAEQNAAGWPPWLTASAAEAIQGWIPLKADSFQKLEKIGQGTYSSVFRAREVETGKMFALKKVRFDNFQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSNSIYLVFEYMEHDLAGLVSRPDIVFSESQIKCYMRQLLSGLEHCHMRGIMHRDIKVSNILLNNEGVLKIADFGLANTISTNNKHHLTSRVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHATMFKPQTNYESSLRERCADFPVFAVNLLETLLSIDSSNRGTASSALMSEYFNIKPYACSPLSLPKYPPSKEMDVKSMEDSSRKKTGGKMREVATSRRQQRRVGKILQDPNNFSKLTSKENMPQNARRDDGKAHLTKGKGGAMHKDYTKPHLDAMSETSQMNVANGNGYSVGSNNAFAWGKRRKQDASSTLSDGSRSKISALDPNFAKGTYDLTNQRVTMDFDPAELMNAQGDRGRAAVRKSRFGRDR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02451 590 MobiDBLite consensus disorder prediction 447 463 - -
Pumo2g02451 590 MobiDBLite consensus disorder prediction 35 65 - -
Pumo2g02451 590 Gene3D Phosphorylase Kinase; domain 1 97 192 - -
Pumo2g02451 590 MobiDBLite consensus disorder prediction 414 446 - -
Pumo2g02451 590 Gene3D Transferase(Phosphotransferase) domain 1 193 434 - -
Pumo2g02451 590 PANTHER CELL DIVISION PROTEIN KINASE 108 398 - -
Pumo2g02451 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Pumo2g02451 590 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02451 590 MobiDBLite consensus disorder prediction 464 487 - -
Pumo2g02451 590 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Pumo2g02451 590 MobiDBLite consensus disorder prediction 569 590 - -
Pumo2g02451 590 FunFam probable serine/threonine-protein kinase At1g54610 97 192 - -
Pumo2g02451 590 CDD STKc_CDK9_like 110 394 - -
Pumo2g02451 590 FunFam probable serine/threonine-protein kinase At1g54610 193 434 - -
Pumo2g02451 590 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02451 590 MobiDBLite consensus disorder prediction 41 56 - -
Pumo2g02451 590 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02451 590 SUPERFAMILY Protein kinase-like (PK-like) 104 395 IPR011009 -
Pumo2g02451 590 MobiDBLite consensus disorder prediction 411 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02451 Pumo-Chr2 53226358 53232563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02451 102 434 Core Cell Cycle Gene Families AT5G10270 47.278 2.14e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo2g02451 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02451 - - gmx:100790917 1050.43