Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02430 ATGCCATGCATCAGGTTCTTAGCCATGGAGCAAGCAAAAGGTGTGAAAGTTCTTGAAGTTTGCTCTGTGGCACCACCTCAGGGATCAACAAGCAATTCCTCTACCCCAACATCCTTGCCTCTCACCTTCTTTGATTTACTATGGCTAAGGCTTCGCCCAATTGAGAATCTTTTCCTCTATGAATTTCCCAACCCAACCATTTCATTCTATGACTCCATTCTTCCAAATCTCAAACACTCTCTTTCCCTCACACTCCAACACTTCCTCCCTTTTGCTGGCACCGTCATTTGGCCCCTTGACTCACCCCACCCCATCATCAACTATGTCCCTGGCAATGCTGTTTCCCTCACCATAGCTGAGTCCAACATTGATTTCTACATTCTTTGTTCCAATACCTGTGAGGCTTCTCAACTTCATTCCTTCACACCCCACTTGAACACTTCCCATGAAGAAACATCTATGATGGCCCTCCAAGTTACCCTCTTTCCTAGCTCTGGCTTTTCTATTGGTATAACCACACACCATGGAGCTATTGATGGCAAAACCTCAGCTTTGTTTCTCAAAGCATGGGCCTATGCCTGCTCCAATAACCTCAAAGAATCATTATCATCTTTGTCATTGCCAAAACACCTCACACCCTTCTATGACAGGTCAATGATAAAAGACACCAAAGGGATTGGTGCAATGTATCTGAAAGATTGGTTGAACCATGGTGGACCAAATAATAGGAGCGTGAAGTTGTTGGATCTTGGTGTAGCTATGTCAACCGAAGCAATTAGAGGGTCGTTTGAATTCAGCTCCTCAAATATCCAAAAGCTCAAGGAACATGCAAAGTATAAGCTGAAAGAGAATAATAATGCTCGCTTTTCAACATTTCAAGTTACATGTGCTTATGTGTTGCAATGTTTGGTCAAAGTAGAACCACCAAAGGCCAATGGAGTGGCTTTTCTGTTCAGTGTGGACTGTAGGTCTCGCTTGGAGCCACCTATTCCGTCCACATATGTTGGAAATTGCATTATTAGCCATAACGTTGTGGATGAGACAAAGAACTTGTTGGGGGATGATGGTTTCATCAATGCTCTTAGGGGAATAAATGAAGCTGTGAATAGGTTGGAGGTTGGAGCACTGATAAGTGGGGCCCCAACTTTGTCTGCACTGATGAAAATTTCAAGGGATAATAAATTAATTCCCACTGCATGGTCTCCACGATTTGAGGTTTATAGTATTGATTTTGGATGGGGAAGGCCCAAGAAGGTGGATCTGACTTCTTTAGACAAAACTGGGGGATTTTGTCTTTCGGACAGTCGCAATGACAACGCAGGAATTGAGATTAGTTTGGTGTTAAACAAACAAGAAATGGAAACTTTCACTGCTCATTTTACTGAAGGACTTGAAGCTCTTTGA 1404 0.4302 MPCIRFLAMEQAKGVKVLEVCSVAPPQGSTSNSSTPTSLPLTFFDLLWLRLRPIENLFLYEFPNPTISFYDSILPNLKHSLSLTLQHFLPFAGTVIWPLDSPHPIINYVPGNAVSLTIAESNIDFYILCSNTCEASQLHSFTPHLNTSHEETSMMALQVTLFPSSGFSIGITTHHGAIDGKTSALFLKAWAYACSNNLKESLSSLSLPKHLTPFYDRSMIKDTKGIGAMYLKDWLNHGGPNNRSVKLLDLGVAMSTEAIRGSFEFSSSNIQKLKEHAKYKLKENNNARFSTFQVTCAYVLQCLVKVEPPKANGVAFLFSVDCRSRLEPPIPSTYVGNCIISHNVVDETKNLLGDDGFINALRGINEAVNRLEVGALISGAPTLSALMKISRDNKLIPTAWSPRFEVYSIDFGWGRPKKVDLTSLDKTGGFCLSDSRNDNAGIEISLVLNKQEMETFTAHFTEGLEAL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02430 467 Gene3D - 15 244 IPR023213 -
Pumo2g02430 467 PANTHER - 15 466 - -
Pumo2g02430 467 Gene3D - 255 467 IPR023213 -
Pumo2g02430 467 Pfam Transferase family 32 461 - -
Pumo2g02430 467 SUPERFAMILY CoA-dependent acyltransferases 287 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02430 Pumo-Chr2 52465868 52467638 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02430 56 462 Monolignol Biosynthesis Gene Families AT5G48930 24.146 2.06e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02430 - - gmx:100785084 674.47