Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02426 ATGCAGAGATATAAAGAATCATCGGATAGCACAAGAGATCAGGTGTCTAATTCTCTATCTGACAATAGGAGTAACAGCAGTCTTAGTGAAAGCTCAATAGTAAAAAGCCCAAGAATAAGGCTGAAGGACCCAACATCCACCACTGTTGAGATGTCAAATTCAACCCAGGGTAGTAAGTCACCGATTTTCATCATGAAACCAGCAAAAGCTGCAAGAAAAACCAATAGTCCTGCTTCCACAGAAATGTCATTTCAGGGTAAATCAAGCCCCAGCAAGTTTAGCCCTGCTAACCCGGCAAATGGAATAATGGGTGACAAGCTTGACAGGCAAACAGCAAAGGGTATCGGTCCAGCAATCAGACATGCCAAGGATTACTCAGTGGATAAGAGTAATAAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTCGTCAAGTAATCAATGGAGAAAATGCCACCAACTCCAGCAATACAGCAGAGGCCAAGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACTAGCCCATCATCAGATTCAAGTAGTAACAGAAGACAACACAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACAACACCCAGACAAAAAGTCAGTGAGATCAGAAATCAAAGGAGGGATTTTAAGCATGAAGTTGACGTAGAAGTCATTTGCATTGATCATTCTGATAGGATCAATGGCAACTCCATCCAGCTAAAGGGCATGAACCAAAATAATGCTGCAGAAGAGTTGAGCAAGGAAAGCTTTATGGCTGAGAAAACAATTACAGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTTCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCAAAAGATTTAGATGATGCTCTGAACACTTATGATAGTAGTGAGGAGAACTCAGAAGATCTTCCACTTTCATCCAACACTGCAGAAGCCAACTTCAGCAGTGGAATCAGTGATACTGACTTGAGAACTCAAACTTTGGTCCAAATTCTCCAACAAATTGACTACAATGATGAGAGACTCACCAATTTCAGAGACGATAAAGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCGGGGCTGCTCAGCAGTCCAAGCTCTAGCCAGGTTTTTCATTCATCAAGTTACCCGATAAACCCAAAGTTGTTCCTTGCACTGGAGCAAATCAAGACAAACAAGATGTGTTTCAATATTGAACACAATGCCAAGAAGATTGCTGGGCTGAATAGTCCTGAGCAAATGCAAAGAAAGCTAATATTTGATGTTGTTAATGACATTCTAGCTCAGAAAATAATATTGGAAAGTTCTACTCTGTGGTGCCAACCAAATCAGCCAGCAGGTACAAAACTAAAAGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATAGGAATGTCAACTTGGCTGATGAGGATGAGAATTTGACAAGTCTCCTGTGGGAAGAGTTGATGCACTGTCCCACAATTTACACAAACAGTTACAGTGAAATACCAAATGTTGTGTTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGATGTTGTGAGAAGTGAACTAGCTAACCATTCTGGTAAGCATTGCAGACAACTGCTGTTTTCCAAGTAG 1692 0.4048 MQRYKESSDSTRDQVSNSLSDNRSNSSLSESSIVKSPRIRLKDPTSTTVEMSNSTQGSKSPIFIMKPAKAARKTNSPASTEMSFQGKSSPSKFSPANPANGIMGDKLDRQTAKGIGPAIRHAKDYSVDKSNKMRTSKLMQSSKVRQVINGENATNSSNTAEAKSPRLQKKFGLERRSPPTSPSSDSSSNRRQHNRQSVELSSPSTTPRQKVSEIRNQRRDFKHEVDVEVICIDHSDRINGNSIQLKGMNQNNAAEELSKESFMAEKTITAEQPSPVSVLDASFYREEPPSPVKKKSDISKDLDDALNTYDSSEENSEDLPLSSNTAEANFSSGISDTDLRTQTLVQILQQIDYNDERLTNFRDDKDPDHKYISEILLASGLLSSPSSSQVFHSSSYPINPKLFLALEQIKTNKMCFNIEHNAKKIAGLNSPEQMQRKLIFDVVNDILAQKIILESSTLWCQPNQPAGTKLKGQLLLDELCTEIDKLQHKNRNVNLADEDENLTSLLWEELMHCPTIYTNSYSEIPNVVLDIERLIFKDLITDVVRSELANHSGKHCRQLLFSK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02426 563 PANTHER LONGIFOLIA PROTEIN 2 559 IPR033334 GO:0051513
Pumo2g02426 563 MobiDBLite consensus disorder prediction 132 164 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 177 211 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 41 61 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 308 327 - -
Pumo2g02426 563 Coils Coil 476 496 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 73 96 - -
Pumo2g02426 563 Pfam Domain of unknown function (DUF4378) 368 541 IPR025486 -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 312 327 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 1 217 - -
Pumo2g02426 563 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02426 Pumo-Chr2 52396551 52398492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02426 47 562 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.162 3.56e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02426 - - gmx:100793602 928.317