Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02425 ATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACAGGTTCCTCACAGGCCAACGCAGTAGCAGCCACAATCAGAACATAACAACTAAAGGTGGAACCAGTAACCATATCAAAGAGGCGAACAATAAAATTCCAAAGGCAACGGCAAATAAAGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCTTCTCGTTCATCTAGCATGTCATCCCTCGAGTTTAATAGAACAATTCAGATAGAGCCACCATCAATCAATCAAATGAAAATTCCAGAAAACTCTAATTCAGGAGCAGCAATGAAGCAAGGCAACCAAGGCCATCAACCCCTTGATTTCTATGATATTGTCAAAGAGTCAATGCATAGAGATGTTCATGGATTGTCAGTAAAAACTGTAGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAATACATTGACTCTCCAAGGCCTCTGGAGCCCTCCAAATCTGTCAACACAGGAGTTATGGCTGCTTGGGATTCACCAAGACTCTCTTATGATGGGAGGGACACACAAGATGCATTCAAATCTGCTACAAAGCCCAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCTATCAGAAGTTTCAATGAAGGAACAAAATCTCACGGCCTTTCGAAGGGTCCACAGAAAGGGTATGGTAGCTCCAGCACAATGCAGCAGCTGCAGGAACCAGAAACTTCTAGAAGACTATCCAGTGTTGTAGCAAAGTTAATGGGACTAGAAGCCTTCCCAGACTGCACAGAAACTTGTGATACTCCGCCACCGATCTCTAGCTGCACCACCAACAAAAATGAGACAATTCCAGGGACCTAG 936 0.4338 MSKKVLTSMKDENPDLQKQIGCISGFFQLFDRHRFLTGQRSSSHNQNITTKGGTSNHIKEANNKIPKATANKVKVARENQQFSTESSGTSMSSSSRSSSMSSLEFNRTIQIEPPSINQMKIPENSNSGAAMKQGNQGHQPLDFYDIVKESMHRDVHGLSVKTVAKEEKKGRILKYIDSPRPLEPSKSVNTGVMAAWDSPRLSYDGRDTQDAFKSATKPKELPRLSLDSRQGSIRSFNEGTKSHGLSKGPQKGYGSSSTMQQLQEPETSRRLSSVVAKLMGLEAFPDCTETCDTPPPISSCTTNKNETIPGT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02425 311 MobiDBLite consensus disorder prediction 228 270 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 38 104 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 38 62 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 286 311 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 200 274 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 292 311 - -
Pumo2g02425 311 PANTHER LONGIFOLIA PROTEIN 1 294 IPR033334 GO:0051513
Pumo2g02425 311 MobiDBLite consensus disorder prediction 203 224 - -
Pumo2g02425 311 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02425 Pumo-Chr2 52393915 52396231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02425 1 298 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 32.595 4.08e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02425 - - gmx:100793602 520.776