Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02410 ATGAGGTTCAACAGTATCACCTCCATAACACACATCCTCCTTCTCCACCTCTTTACACACCTCCAAGCGTACACTCCAGTGGACAACTTCACCATCAGTTGCGGCACCACTGGAAAGTCCTACAACGGGGAAAGGACGTGGACGGGGGACATAGGTTCCAGGTTCTTATCTCATCAAGACGGCACCGTTTCCGCTAATGCAACAACACAATCTCCTTCTACCAATCAAGTGCCCTACACCACAGCACGCTTGTCTCGTTCCCAATTCAATTACTCCTTCCCCGTCACTGCAGGCCCCAAATTCCTTCGCCTCTTCTTCTACCCAGCTTCCTACCCTTCGTTTCTACGCACCGACGCATCCTTCACCGTTCAATCTAACCAATTCACCCTCCTCTACTGTTTCAACGCCTCTCTAAATGTTGACGCTGAAAACACGAAAACCATCTTCAGAGAATACGTCGTCAATGTGGACTACGGTGAGAAGCTGAACCTGAGCTTCACTCCGTCGCAGCCAAACTCCTACGCTTTCATCAACGGGATCGAGGTTCTTTCCGTGCCAAGCAATCTGTATTACACGTCAGCAAATGACGTGGGTTTCAAGCTCGTGGGAACTGACACGCTGTATGGTGTAAGAACCAACACTGCACTGGAGACAGAGTATAGAATCAAAGTGGGAGGGCAAGGAATCTCGCCACGAAACGACACCGGTTTGTTCAGGAACTGGGCTGGTCATGATGAAGATTATTTAATTAAACAAAAAAATCCACAGAATAACGATCTATCAGCTAACACGGATGGTAAGATAAACATAACGGTGAATCCTGATTACGTGGCACCCAAGGAACTCTACAAAACAGCTCGTGACATGGGTCTGAACAAGAGTCTCGAGTTGACTTGGGAGTTCACCGTTGACTCTGGTTTCACTTACATGGTCAGGCTCCACTTTTGCGAGCTTGACCCGAATATTACTAACATCGGAGACAGGGTGTTCTTCATTTACATAGGGAGCGAGTTGGCTGAGGACCACGCTGATGTTATGAGTTGGAGCCAGAAACAGAGAGGTCTTGCTGTGTACAAAGACTTCGCCATTTTTATTCCCAAGAATGATGCTCAGAAAAAGGTTAATCTCTCGCTCCAAATGCATCCTTATCAAAGTGCCAATGATCCGTTCTTGAACGGTCTTGAGATCTTCAAAATCAGTGAGTCTAACAATCTCGCCGGGCATAACCCGCAGAACAACATGCCCGTCCAAAAGGGAAAGAACAACAGTGGAAAACTGAAAATTGTCGTAGCATGGGTTATATCCGGCGTCGTTTTGATCTCGCTTGTTGTTTTATTCGTCTTTTGGTGGGTGAGCGCCAAGTTCGGTTTACTCTCGTTCTCAACCAACACGCAGGATTACAGGCTGCCAACCAACACGCAGGATTACAGGGAAAATCGATGGCCGTACGATCGCCTCTGCCAGCACTTCTCCATCGTCGAGATCAAAGCCGCCACCAACAACTTCGACAACGCCTCCGTTGTTGGCGTCGGAGGATTCGGCCACGTTTACAAGGGCTACATCGACGGCATTTCCGTCCCCGTAGCTATCAAGCGTCTCAAACAGGGTTCGAAGCAAGGGTTTGAAGAGTTCCTGACCGAGATCGGGGTGCTCTCGCAGCTCCGCCACCGCCATCTCGTTCCTCTCATCGGCTACTGCAATAAAAACAAGGAGATGATCGTGGTCTACAATTTCATGACACGTGGCAACCTCCGTGACCATCTCTACAAATCCGATAAACCACCTTTATCATGGAAGCAACGCTTGCAGATTTGTATTGACGTGGCACACGGGCTGCATTATCTTCACAAATTAGCCGCGACGTACACGATCATCCACGGCGACGTGAAAACCACCAACATCTTGTTGGATGAGGACTGGGTGGCGAAGGTTTCAGACTTTGGGATTTCCAAAACTGGGCCCATGGGCGCGTCCAAGGCCCATGTCAGCACCACCGCTGTGAAGGGCAGCTTTGGGTATATAGACCCGGAGTATTATAAACGCCAGCATTTGACGGAAAAGTCTGACGTGTACTCTTTTGGAGTAGTGTTGTTTGAGATACTGTGCGCTCGTCCAGCTGTAATCCACACTGCGGAGCCGAAGCAAGAGAATCTTGCTCATTGGGTCAAATACTGTTACCAAAGTGGGACCATGGAGCAGATTGTGGACCCCACGTTGAAGGGGAGGATCGCCCCCGAGTGCTTCGTGAAGTTTTGTGAGATTGGGATGAGTTGTTTGTCACAGGTTGGGACGCAGAGGCCATCCATGAACGACGTCATTTGGATGCTACAGTTTGCGCTGCAGCAGCAAGAGAGAGCAGAATGCGAAAATGCTGGTATTATTATCGATATTTAG 2394 0.49 MRFNSITSITHILLLHLFTHLQAYTPVDNFTISCGTTGKSYNGERTWTGDIGSRFLSHQDGTVSANATTQSPSTNQVPYTTARLSRSQFNYSFPVTAGPKFLRLFFYPASYPSFLRTDASFTVQSNQFTLLYCFNASLNVDAENTKTIFREYVVNVDYGEKLNLSFTPSQPNSYAFINGIEVLSVPSNLYYTSANDVGFKLVGTDTLYGVRTNTALETEYRIKVGGQGISPRNDTGLFRNWAGHDEDYLIKQKNPQNNDLSANTDGKINITVNPDYVAPKELYKTARDMGLNKSLELTWEFTVDSGFTYMVRLHFCELDPNITNIGDRVFFIYIGSELAEDHADVMSWSQKQRGLAVYKDFAIFIPKNDAQKKVNLSLQMHPYQSANDPFLNGLEIFKISESNNLAGHNPQNNMPVQKGKNNSGKLKIVVAWVISGVVLISLVVLFVFWWVSAKFGLLSFSTNTQDYRLPTNTQDYRENRWPYDRLCQHFSIVEIKAATNNFDNASVVGVGGFGHVYKGYIDGISVPVAIKRLKQGSKQGFEEFLTEIGVLSQLRHRHLVPLIGYCNKNKEMIVVYNFMTRGNLRDHLYKSDKPPLSWKQRLQICIDVAHGLHYLHKLAATYTIIHGDVKTTNILLDEDWVAKVSDFGISKTGPMGASKAHVSTTAVKGSFGYIDPEYYKRQHLTEKSDVYSFGVVLFEILCARPAVIHTAEPKQENLAHWVKYCYQSGTMEQIVDPTLKGRIAPECFVKFCEIGMSCLSQVGTQRPSMNDVIWMLQFALQQQERAECENAGIIIDI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02410 797 Gene3D - 29 185 - -
Pumo2g02410 797 Gene3D - 215 401 - -
Pumo2g02410 797 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02410 797 FunFam FERONIA receptor-like kinase 29 186 - -
Pumo2g02410 797 FunFam FERONIA receptor-like kinase 214 400 - -
Pumo2g02410 797 Pfam Malectin-like domain 32 399 IPR024788 -
Pumo2g02410 797 FunFam receptor-like protein kinase FERONIA 464 578 - -
Pumo2g02410 797 SMART serkin_6 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02410 797 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672|GO:0006468
Pumo2g02410 797 PANTHER OS03G0124300 PROTEIN-RELATED 9 454 IPR046957 GO:0004672
Pumo2g02410 797 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Pumo2g02410 797 Gene3D Transferase(Phosphotransferase) domain 1 579 794 - -
Pumo2g02410 797 FunFam Receptor-like protein kinase FERONIA 579 793 - -
Pumo2g02410 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pumo2g02410 797 SUPERFAMILY Protein kinase-like (PK-like) 481 783 IPR011009 -
Pumo2g02410 797 Gene3D Phosphorylase Kinase; domain 1 487 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02410 Pumo-Chr2 52193098 52195843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02410 24 797 Receptor kinase-like Gene Family AT3G51550 46.871 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02410 Malectin_like 5.5e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02410 - - gmx:102668655 1180.62