Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02408 ATGACGCAACCACCAGCAACTGCAGCTTTCAAAGTAATCCAAGTTTGTTCAGTGGCACCATTTAAGGGACCAACAACCCCTTCCACAGGTGTTCCAACCTCTCTTCAACTAACCTTCTTCGACCTCTTATGGCTACGCTTCCCACCCGTTGAGCGTCTCTTCTTCTATTCCTTCCCACACCCCACCTCTTCATTTCTTCACTCCCTCAAACACTCTCTTTCCCTCACTCTGCAACACTTTCTCCCTTTCTCTGGCACCCTCACATGGCCCTCTCACTCTTCCAAACCCATCATCAACTATGCCCCCGGTGACACTGTCTCCTTCACTATTGCCGAGTCCAACGAAAATTTCAATGATCTTTGCTCTCATCTCTGTGAAGCATCGCAACGACACCGTTTAATACCCCACTTGACCACTTCCCATGATCAAGCATCTGTGCTGGCACTGCAAGTAACTGTGTTCCCAAACGCTGGCTTTTGCATTGGAATAACCGCACATCATGCAGCTTTCGACGGAAAATCTTCAACCATGTTCATCAAATCATGTGCCTATATATGCTCTAACCTTCAAAACCCTACACCAACACCATCTCTATCGTTACCTCAGCATCTCACACCTTTCTATGACAGATCAGTGATAAGAGACCCTTCTGGAATCGCTGAAGCGTACGTGGACGCGTGGCAGAAGAGCGGTGGACAAAACAGTAGAAGTCTCAAGGTGTGGGAATTCCCCAGTGCGAGTGATGGACTCAAAGGTTTGTTTGAATTAACCCCTTCACAGATTCAAAAGCTCAAGCAACATGCAAAGTCTAAGATGAAAATGAAGGATCTTCAGTTATCAACGTTTGCTGTTACGTGTGCTTACGTGTTTACGTGCTTGGTCAAAGCAGAACAACCAAAGGAAGAGAGTGTAGGTTTCATATTTGCTGTGGATTGTAGACCCCGCTTGGACCCTCCAATTCCTGCCACGTATTTTGGAAACTGCATTGTGGGAAAAAAGTTTATGGCTTTGACCAAGAACATAGCAGGAAGCGATGGATTCATTACTGCTTTGGAGGGGATAAGTGAGGGTTTGAATAGAGATTATAGAGTGAAGGATGGAATGCTAAGTGGAGCAGAAACTTGGCTTTCGGTATTGCATAAAAAAAGGGAGGGTAGGTTATTCTCTATTACTGGATTTCCAAGGTTTGATGTTTATAGTATTGATTTTGGGTGA 1215 0.4519 MTQPPATAAFKVIQVCSVAPFKGPTTPSTGVPTSLQLTFFDLLWLRFPPVERLFFYSFPHPTSSFLHSLKHSLSLTLQHFLPFSGTLTWPSHSSKPIINYAPGDTVSFTIAESNENFNDLCSHLCEASQRHRLIPHLTTSHDQASVLALQVTVFPNAGFCIGITAHHAAFDGKSSTMFIKSCAYICSNLQNPTPTPSLSLPQHLTPFYDRSVIRDPSGIAEAYVDAWQKSGGQNSRSLKVWEFPSASDGLKGLFELTPSQIQKLKQHAKSKMKMKDLQLSTFAVTCAYVFTCLVKAEQPKEESVGFIFAVDCRPRLDPPIPATYFGNCIVGKKFMALTKNIAGSDGFITALEGISEGLNRDYRVKDGMLSGAETWLSVLHKKREGRLFSITGFPRFDVYSIDFG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02408 404 Gene3D - 247 404 IPR023213 -
Pumo2g02408 404 SUPERFAMILY CoA-dependent acyltransferases 254 361 - -
Pumo2g02408 404 PANTHER - 10 404 - -
Pumo2g02408 404 Pfam Transferase family 28 404 - -
Pumo2g02408 404 Gene3D - 9 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02408 Pumo-Chr2 52176726 52177987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02408 27 404 Monolignol Biosynthesis Gene Families AT5G48930 28.429 8.73e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02408 - - gmx:100800849 587.8