Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02407 ATGACGCAACCAGAAGCTACAACACCTTTCAAAGTAATCCAAGTTTGTTCAGTAGCACCGTTTCATGAACCAACCCCTTCCACCGTTGTTCCAACTTCTCTCACACTAACCTTCTTCGACCTCTTATGGCTACGCTTCCCACCCGTTGAGCGTCTCTTCTTCTATTCCTTCCCACACCCCACCTCTTCATTTCTTCACTCCCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTTCTCCCTTTCTCTGGCACCCTCACATGGCCCTCTCACTCTTCCAAACCCATCATCAACTACGTCCCCGGTGACACTGTCTCCTTCACTATTGCCGAGTCCAACGAAAATTTCAATGATCTTTGTTCCCATCTCTGTGAAGCAGCGAAACGACACCGTTTGATACCCCACTTAACCACTTCCCATGATCAAGCATCTGTGTTGGCACTGCAAGTAACTGTGTTCCCAAACGCTGGCTTTTGCATTGGAATAACCACACACCATGCTGCTTTTGATGGAAAATCTTCAACCATGTTCATCAAATCATGGGCCTATATATGCTCCAACCTTCAAAACAATACACCAACACCATCCCTATCGTTACCTCAGCATCTCACACCATTCTTTGACAGATCACTGGTAAGAGACCCTTCTGGAATCGGTGAAGCGTATGCGGACACGTGGCAGAAGAACGGTGGACAAAACAGTCGAAGTCTCAAGGTGTGGGAATTCCCCAGTGCGAGTGATAATGGACTCAAAGGTTTGTTTGAATTAACCCCCTCACAGATTCAAAAGCTCAAGCAACATGCAAAGTCTAAGCTGAAAACGAAGGATCTTCAGTTATCAACGTTTGCTGTTACGTGTGCTTATGTGTTGACGTGCTTGGTCAAAGCAGAACAACCAAAGGAAGAGAGTGTAGGTTTCATATTTGCTGTGGACTGTAGATCCCGCTTGGACCCTCCAATTCCTGCTACGTATTTTGGAAACTGTGTTTTGGGGCAAAAGTTTATGGCTGTGACAAAGAACTTAGCAGGAAGCGATGGATTCGTTAGTGCTTTGGAGGGGATGAGTGAGGGTTTGAATAGAGTGAAGGAGGGAGTGCTAAGTGGAGCAGAAACTTGGGTTTCGGAATTGCATAAAAGAGGGGAGAGGAGGATATTCACTAATGCTGGATCTCCATGGTTTGAGGTTTATAGTACTGATTTTGGGTGGGGAAGGCCAAGGAAGGTGGATATGACTTCCACAGACAGAACAGGAGCATTTTCTCTTGGTGAAAGTAGGGACAACAGTGGAGGAATTGAGATTGGATTGATGTTAAGTCAACGTCAGATGGAAGATTTTACTGCCCTTTTTGTTCAAGGACTTGAATCCTTTTGA 1371 0.4559 MTQPEATTPFKVIQVCSVAPFHEPTPSTVVPTSLTLTFFDLLWLRFPPVERLFFYSFPHPTSSFLHSLKHSLSLTLQHFLPFSGTLTWPSHSSKPIINYVPGDTVSFTIAESNENFNDLCSHLCEAAKRHRLIPHLTTSHDQASVLALQVTVFPNAGFCIGITTHHAAFDGKSSTMFIKSWAYICSNLQNNTPTPSLSLPQHLTPFFDRSLVRDPSGIGEAYADTWQKNGGQNSRSLKVWEFPSASDNGLKGLFELTPSQIQKLKQHAKSKLKTKDLQLSTFAVTCAYVLTCLVKAEQPKEESVGFIFAVDCRSRLDPPIPATYFGNCVLGQKFMAVTKNLAGSDGFVSALEGMSEGLNRVKEGVLSGAETWVSELHKRGERRIFTNAGSPWFEVYSTDFGWGRPRKVDMTSTDRTGAFSLGESRDNSGGIEIGLMLSQRQMEDFTALFVQGLESF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02407 456 SUPERFAMILY CoA-dependent acyltransferases 255 455 - -
Pumo2g02407 456 Pfam Transferase family 33 446 - -
Pumo2g02407 456 Gene3D - 10 237 IPR023213 -
Pumo2g02407 456 Gene3D - 248 456 IPR023213 -
Pumo2g02407 456 PANTHER - 11 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02407 Pumo-Chr2 52155947 52157780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02407 26 451 Monolignol Biosynthesis Gene Families AT5G48930 27.416 1.51e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02407 - - gmx:100800849 698.738