Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02406 ATGGTTCCTTTTCCCTGTCTACCATGCTTCTCCACCACAAAATCCAACACCACAAACCACTCCATCGCAATAGAACAACTCTGTCACCGCTTCTCCCTTGCACAGCTTAAAGCAGCCACAAACGGGTTCAACCCAAGTTTAATTGTTGGTGGAGAAGGCCCATGTCAGGTCTACAAAGCCCACCTCAAAGCCCAAGGAGACGTCGCCATCAAGCACTTCAAGACTAGAAGCCCAGCTGGGGAAATAGAATTCAGGGTCGAAGTCAAGATTCTGTGTCAACTACACCACCCAAACGTTGTTCCTTTGATTGGTTTCTGTGAGCACAAAAATGACAAGTTCGTTGTGTATGATTATGTCCCTAATGGAAGCCTCTATGATTGTTTGCATGGCACCAACAATGACAATGTTGTTGTTCCCTTGTCATGGAAACAAAGACTTCACATCTGCATTGGTGTGGCTCGTGGACTACACTACATTCATTTTGGAACCAAGATACCTATCATGCACCGTGCAGTGACATCAAGCAACATTCTTTTGGACCATAATTTAGTGCCTAAAGTGGCAGATTTTGGACTCTGCAAGAAGCAACCCGAAGGGGAGTCAAGGCCAAAACCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGCTTAGTTTGGAATATGTGGAGCCAGAGTATAGTATTACTGGAAGGTTATCACATAAATCTGATGTGTACTCTTTTGGTGTGGTTATGTTGGAGGTTTTGTGCAGGAAGGAAGCGTGTATTTTGACCCCAGGTAGAGAATCTAGAGATTGTGAGTATCTTGTCAAATGGGCCTTTGATGATGAAAGGAAGGGGGTTCCTGAGAAGATTGTTGATCCATCTCTCATTGGAAAAATAGCACCTGCTTGTTGGGAAATGTTCATTGAGATCGTTCAGAGATGTCTGGCTTCAGTTGAAGAGAGGCCAATGATGGGTGAAGTGGAGGTGGTTCTTGAAAATGCATTGCTGTTGCAAGAGAGAGCAGATGCTGTGAAGTGTGATGGGATATAA 1032 0.4457 MVPFPCLPCFSTTKSNTTNHSIAIEQLCHRFSLAQLKAATNGFNPSLIVGGEGPCQVYKAHLKAQGDVAIKHFKTRSPAGEIEFRVEVKILCQLHHPNVVPLIGFCEHKNDKFVVYDYVPNGSLYDCLHGTNNDNVVVPLSWKQRLHICIGVARGLHYIHFGTKIPIMHRAVTSSNILLDHNLVPKVADFGLCKKQPEGESRPKPPRVELRENLELSLEYVEPEYSITGRLSHKSDVYSFGVVMLEVLCRKEACILTPGRESRDCEYLVKWAFDDERKGVPEKIVDPSLIGKIAPACWEMFIEIVQRCLASVEERPMMGEVEVVLENALLLQERADAVKCDGI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02406 343 PANTHER OS07G0166700 PROTEIN 27 332 IPR045272 GO:0004714|GO:0006468
Pumo2g02406 343 SUPERFAMILY Protein kinase-like (PK-like) 17 327 IPR011009 -
Pumo2g02406 343 FunFam Receptor-like protein kinase ANXUR2 9 118 - -
Pumo2g02406 343 ProSiteProfiles Protein kinase domain profile. 43 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02406 343 Pfam Protein tyrosine and serine/threonine kinase 56 270 IPR001245 GO:0004672|GO:0006468
Pumo2g02406 343 Gene3D Transferase(Phosphotransferase) domain 1 119 339 - -
Pumo2g02406 343 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02406 Pumo-Chr2 52154313 52155783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02406 28 333 Receptor kinase-like Gene Family AT5G59700 44.300 3.79e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02406 PK_Tyr_Ser-Thr 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02406 - - gmx:100800314 634.409