Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02404 ATGTACATTATAAAGGTTGCGGTGCCACCGGGAATTTCTCCGACAGAGAAAGGACATGGGTGGGGGACACAGACTCAAAGCTCTTATTTCATCAAGACGGCACCGTTTCCACTGAAGCAACAACACAATTTCCTTCTATCAATCAAGTTCCCTACACCACAGCACGCTTGTCCCGTTCCCAATTCAGCTACTCCTTCCCCGTCTCCTCAGGCCCCAAATTTGTTCCGTCTCTTCTTCTACCCCGCTGACTATCCTTCCTTTCCCCGCAACGACGCATACTTCACCGTCCAATCCAACAGATTTACCCTCCTCAACGGTTTCAATGCCTCTCTAAATGCTGACGCGGAAGGCAGGGATACAATTTTCAGAGAATACATGGTCAACGTGAACGATGGAGAGAGGCTGAACCTCATCTTTACTCCTTCGCAACCAAACTCCTACACTTTCATCAACGGAATTGAGGTACTTTCCATTCCAAGCGATCTGTATTACACGCCAGCAAATGATGTGGGATTCACGTTCGTGGGAAGAAACATGCTGTACACCCTCGGAACCAGCTTTGCGTTGCAGACAGAGTATAGAATCAAAGTCGGAGGGCAAGCAATCTCGGCACCAAACGACACCGGTTTGTTCAGGAACTGGACTGGTGACGAAGAAGATTATTTAGTTAAACATAATCCACAGAACAATGATCTACCAGCTAACACGGATGGTAAGATGAACATAACCGTGAATCCTGATTACGTGGCACCCAAAGAACTTTACAGAACAGCGCGTGACATGAGCACAAACGCTACTCTGAACAAAATCCTCAACCTGACTTGGGAGTTCCCCGTTGACTCTGGTTTCACTTACATGATCAGGCTTCACTTTTGCGAGCTTGACCCAAATATTAAGGACATCAAGGACAGGGTGTTCTTAATTTACATAGCAAGCCAGTTGGCTGAGGACAACGCTGATGTTATGGAATGGAGCCAGAAACAGAAAGGTGTTAGTGTACACAGAAACTATGCCGTTTTGATTCCAAAGAATAATTATCAAAAACGGGTTAATCTCTCGCTCCAAATGCATCCTTATGAAACTAGTGATAAAACAAGATACAGCGACCCATTCTTGAACGGTCTTGAGATTTTCAAAATAAGCGAGGCCGGGTCTAACAACCTCGCCGGACCTAACCCGGACTTGATTCAGACACCAAAGAACAACATACCCGTTCAAAACAAAAAGAGCCGCAGGGGAAGCCAAATGACCATAATTGGTGTCGTCGTGGGGTTGGTATCCGGGGTCGTTTTGATCTCCGATGTCATTTTTTTCGTTGTATTTTTGCAGCGCAAGACAACCACTGATATGAAGACCAAGGATAAGTCAACCAACAAGCAAAATTACTCGCTGCCATCCGATCTCTGCTGTCGCTTCTCCCTCGTCGAGATCAAAGCCGCCACCCAAAACTTTGATGACGTCTTCATCATCGGTGTTGGAGGATTTGGCCACGTCTACAAGGGCTACATCGATGACAGTTCTACCCCTGTCGCCGTCAAGCGCCTCAAACCGGGTTCACAGCAGGGGGCTAGTGAGTTTCTGAATGAAATCGAGATGCTCTCACAACTCCGCCACCTCCATCTGGTCTCGCTCATCGGCTACTGCAACGATAACAATGAAATGATCCTGGTCTACTGA 1677 0.4693 MYIIKVAVPPGISPTEKGHGWGTQTQSSYFIKTAPFPLKQQHNFLLSIKFPTPQHACPVPNSATPSPSPQAPNLFRLFFYPADYPSFPRNDAYFTVQSNRFTLLNGFNASLNADAEGRDTIFREYMVNVNDGERLNLIFTPSQPNSYTFINGIEVLSIPSDLYYTPANDVGFTFVGRNMLYTLGTSFALQTEYRIKVGGQAISAPNDTGLFRNWTGDEEDYLVKHNPQNNDLPANTDGKMNITVNPDYVAPKELYRTARDMSTNATLNKILNLTWEFPVDSGFTYMIRLHFCELDPNIKDIKDRVFLIYIASQLAEDNADVMEWSQKQKGVSVHRNYAVLIPKNNYQKRVNLSLQMHPYETSDKTRYSDPFLNGLEIFKISEAGSNNLAGPNPDLIQTPKNNIPVQNKKSRRGSQMTIIGVVVGLVSGVVLISDVIFFVVFLQRKTTTDMKTKDKSTNKQNYSLPSDLCCRFSLVEIKAATQNFDDVFIIGVGGFGHVYKGYIDDSSTPVAVKRLKPGSQQGASEFLNEIEMLSQLRHLHLVSLIGYCNDNNEMILVY 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02404 558 FunFam Receptor-like protein kinase FERONIA 456 558 - -
Pumo2g02404 558 SUPERFAMILY Protein kinase-like (PK-like) 459 558 IPR011009 -
Pumo2g02404 558 Pfam Malectin-like domain 74 380 IPR024788 -
Pumo2g02404 558 FunFam FERONIA receptor-like kinase 187 381 - -
Pumo2g02404 558 ProSitePatterns Protein kinases ATP-binding region signature. 490 513 IPR017441 GO:0005524
Pumo2g02404 558 Pfam Protein tyrosine and serine/threonine kinase 490 557 IPR001245 GO:0004672|GO:0006468
Pumo2g02404 558 MobiDBLite consensus disorder prediction 390 409 - -
Pumo2g02404 558 ProSiteProfiles Protein kinase domain profile. 484 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02404 558 Gene3D - 66 158 - -
Pumo2g02404 558 Gene3D - 188 381 - -
Pumo2g02404 558 FunFam FERONIA receptor-like kinase 63 159 - -
Pumo2g02404 558 PANTHER OS03G0124300 PROTEIN-RELATED 69 452 IPR046957 GO:0004672
Pumo2g02404 558 Gene3D Phosphorylase Kinase; domain 1 444 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02404 Pumo-Chr2 52010427 52013243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02404 67 558 Receptor kinase-like Gene Family AT3G51550 41.300 1.35e-110 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02404 Malectin_like 4.1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02404 - - gmx:100790235 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02404 2 52010427 52013243 Pumo5g00705 5 13928211 13932601 PCT