Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02403 ATGAGGTTCAACAGTATCACCTCCGTGACACTCTTCCTCTTTCTCCACCTCTTTGCACACCTCCAAGCGTACACTCCAGAGAACAATTTCACAATCAGTTGCGGTGCCACCGAAAAATCCTTTGACGGCGAAAGGACATGGACGGGAGACACAGAGACAGAGTACTCGATGCTCTTGTCTAGTCAAGACGGCACCTTCAGTTACTCTTTCCCCGTCACTGGAGGCCCCAAATTTGTTCGCCTCTTCTTCTACCCAGCTTCTTACCCTTCCTTTCCCCGCACTGACGCCTCCTTCACCGTTCAATCCAATCAATTCGTTCTCCTCCACGATTTCAACGCCTCTTTAAACGCTGACGCTGAAAACAAGGAAACCATCTTTAGAGAATACGTCATCTATGTGAACGAGGGTGAGAGGCTTATCCTCACCTTCACTCCATCACAACCAAACTCCTATGCTTTCATCAATGGAATCGAGGTAATTTCCATGCCAAGCAATCTGTATTACACGTCACCAGATGACACGGGATTCAAGTTGGTGGGAAGTGACACGTTGTACAGCATAAAAACCAGATTTGCACTGGAGACAGAGTATAGAATCAACGTTGGAGGACAAGAAATCTCGCCACGAAACGACACCAATTTGTTCAGAGAATGGTTTGGTCACGATGAAGATTTTTTAATTAAGAACAATCCACAGAATAATGATCTACCAGCTGACTTGGATGGTAAGATGAACATAACTGTGATTGTGAATCCCGATCATGTGGCACCCAAGGAACTGTACAGAACAGCGCGTGACATGGGCACAAACGCCACTCTAAACAAAATCAGCAACCTGACTTGGGAGTTCCCCGTTCATTCTGGTTTCACTTATATGGTCAGGCTCCACTTTTGCGAACTTGATCCCAATATTAATGACAACGGTGACAGGGTATTCTTCATTTACATAGCAAGCCAGTTGGCTGATGATCGCGCTGATGTTATGAGATGGACTCAGAAACAGAAAGGTCTCGCTGTGTACAAAGACTACGCCATTTTGATTCTCAAGAATGATACTCAGAAAAAGGTTAATCTCTCGCTCCAATTACATCCTTATGAAAGTGGTAGGGATACGAAATACAGTGACGCGTTCTTGAACGGTCTCGAGATCTTCAAAATCAGTGACACTTTCTCTAACAATCTCGCCGGACCTAACCCGGACCCGGTTCAGTCTCCACTTAGCAACATGCTTGTCCAAAAGGGAAAGAACAGAAGCAGAACACTGATAATTGGTATTGTCACGGGGGTGGTATCTGTGGTCGTTTTGATTTCACTTTTCATTTTCATTGTCGTGTTGTCACCGACTTCCAAGTGGGGTCGACTCTCGTCATCAACGACCAAGTCAACCAACACGCATAATTGTTCTCTACCATCCAATCTTTGTCGCCGCTTCACCCTCAATGAGATCAAAGCTGCCACCAAAAACTTCAACAATGTCTTCATCGTCGGTGTCGGGGGATTCGGCCATGTCTACAAGGGCTACATTGACGGTGGTTCCATCCCTGTCGCCATCAAGCGCCTCAGACCGGGTTCGCAACAAGGGGCCCAAAAGTTCATGAATGAGATCGAGATGCTCTCCCAACTCCGCCATCGCCATCTCGTGTCACTCATCGGTTATTGTAGCGATAAGAACGAGATGATATTGGTCTACGATTTTATGGCACGTGGCAACCTCTGTGACCATCTCTATGACACCGAAAATCCCCCTCTCTCATGGAAGGAACGCTTGCGAATTTGCATTGGCGCTGCTCGTGGGCTACGTTATCTTCACAGTGACGCGAAACAAAGGATCATCCACCGCGACGTGAAAACCACCAACATCTTGTTAGATGACAAGTGGGTCGCCAAGGTTTCGGACTTTGGCCTATCCAAGTTTGTGCCCAATGACATGTCCAAGGCCCATGTCAGCACCGCTGTGAAAGGAAGCTTTGGGTATTTAGACCCGGAGTATTTTATTCGGCACCGTTTAACAGAGAAATCTGATGTGTATTCTTTTGGGGTAGTGCTGTTTGAGATACTGTGTGCTCGTCCGCCTCTCATCCACACTGAGGAGACTGAACAGTTGTCCCTTGCTAATTGGGCCAGGTATTGTTACCAAAATGGGACTGTGGCACAGATTGTGGATCCCATTTTGAAGGGGAAGATTGCGCCCGAGTGCTTCAAGAAGTTTTGTGAGATTGGGGTGAGTTGTTTGTTACACGACGGGACGCAGAGGCCATCGATGAACGAAGTCGTTTCGATGTTGGAGTCTGTGCTGAAACTGCAAGAGATTGCGGAGCAATGCGAACATGCTGATATTGTTACCCAGGGAGTTCAAGAAAAAATACAGGAAGATAGTGACGATGTGTTTAACAAAGGAGAGTACGACCATGGTTACAAGGACAGTGATAAGTTGCTTGTCTGA 2442 0.4672 MRFNSITSVTLFLFLHLFAHLQAYTPENNFTISCGATEKSFDGERTWTGDTETEYSMLLSSQDGTFSYSFPVTGGPKFVRLFFYPASYPSFPRTDASFTVQSNQFVLLHDFNASLNADAENKETIFREYVIYVNEGERLILTFTPSQPNSYAFINGIEVISMPSNLYYTSPDDTGFKLVGSDTLYSIKTRFALETEYRINVGGQEISPRNDTNLFREWFGHDEDFLIKNNPQNNDLPADLDGKMNITVIVNPDHVAPKELYRTARDMGTNATLNKISNLTWEFPVHSGFTYMVRLHFCELDPNINDNGDRVFFIYIASQLADDRADVMRWTQKQKGLAVYKDYAILILKNDTQKKVNLSLQLHPYESGRDTKYSDAFLNGLEIFKISDTFSNNLAGPNPDPVQSPLSNMLVQKGKNRSRTLIIGIVTGVVSVVVLISLFIFIVVLSPTSKWGRLSSSTTKSTNTHNCSLPSNLCRRFTLNEIKAATKNFNNVFIVGVGGFGHVYKGYIDGGSIPVAIKRLRPGSQQGAQKFMNEIEMLSQLRHRHLVSLIGYCSDKNEMILVYDFMARGNLCDHLYDTENPPLSWKERLRICIGAARGLRYLHSDAKQRIIHRDVKTTNILLDDKWVAKVSDFGLSKFVPNDMSKAHVSTAVKGSFGYLDPEYFIRHRLTEKSDVYSFGVVLFEILCARPPLIHTEETEQLSLANWARYCYQNGTVAQIVDPILKGKIAPECFKKFCEIGVSCLLHDGTQRPSMNEVVSMLESVLKLQEIAEQCEHADIVTQGVQEKIQEDSDDVFNKGEYDHGYKDSDKLLV 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02403 813 SMART serkin_6 489 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02403 813 ProSitePatterns Protein kinases ATP-binding region signature. 495 518 IPR017441 GO:0005524
Pumo2g02403 813 ProSiteProfiles Protein kinase domain profile. 489 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02403 813 Pfam Malectin-like domain 62 386 IPR024788 -
Pumo2g02403 813 Gene3D Phosphorylase Kinase; domain 1 450 565 - -
Pumo2g02403 813 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Pumo2g02403 813 Gene3D - 26 163 - -
Pumo2g02403 813 Gene3D - 192 387 - -
Pumo2g02403 813 Gene3D Transferase(Phosphotransferase) domain 1 566 788 - -
Pumo2g02403 813 Pfam Protein tyrosine and serine/threonine kinase 495 761 IPR001245 GO:0004672|GO:0006468
Pumo2g02403 813 FunFam FERONIA receptor-like kinase 191 387 - -
Pumo2g02403 813 CDD STKc_IRAK 495 762 - -
Pumo2g02403 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pumo2g02403 813 PANTHER OS03G0124300 PROTEIN-RELATED 8 455 IPR046957 GO:0004672
Pumo2g02403 813 FunFam Receptor-like protein kinase FERONIA 566 782 - -
Pumo2g02403 813 FunFam receptor-like protein kinase FERONIA 452 565 - -
Pumo2g02403 813 FunFam FERONIA receptor-like kinase 60 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02403 Pumo-Chr2 51925274 51927978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02403 66 773 Receptor kinase-like Gene Family AT3G51550 51.359 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02403 Malectin_like 1.4e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02403 - - gsj:114381619 1114.75