Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02402 ATGAGGTTCAACAGTATTACCTCCGTGACACTCTTCCTCTTTCTCCACCTCTTTACACACCTCCAAGCGTACACTCCAGAGAACAATTTCACAATCAGTTGCGGTGCCACTGAAAAATCCTTTGACGGCGAAAGGACATGGACGGGAGACACAGAGACAGAGTACTCGATGCTCTTGTCTAGTCAAGACGGCACCGTTTCCGCTAAACCAACAAATCCTTCTACCAATCAAGTCCCCTATACCGCAGCTCGCCTTTCTCGTTCTCAGTTCAGTTACTCTTTCCTCGTCACTGGAGGCCCCAAATTTGTTCGCCTCTTCTTCTACCCAACTTCTTACCCTTCCTTTCCACGCACTGACGCCTCCTTCACCGTTCAATCCAATCAATTCGTTCTCCTCCACGATTTCAACGCCTCTTTAAACGCTGACGCTGAAAACAAGGAAACCATCTTCAGAGAATACGTCATCTATGTGAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCATCACAACCAAACTCCTATGCTTTCATCAATGGAATCGAGGTAATTTCCATGCCAAGCAATCTGTATTACACGTCACCAGATGACACGGGATTCAAGTTGGTGGGAAGTGACACGTTGTACAGCATAAAAACCAGATTTGCACTGGAGACAGAGTATAGAATCAACGTTGGAGGACAAGAAATCTCGCCGCAAAACGACACCAATTTGTTCAGAGAATGGTTTGGTCAAGATGAAGATTTTTTAATTAAAAACAATCCACAGAATAATGATCTACCAGCTGACTTGGATGGTAAGATGAACATAACTGTGATTGTGAATCCCGATCATGTGGCACCCAAGGAACTGTACAGAACAGCGCGTGACATGGGCACAAACGCCACTCTAAACAAAATCAGCAACCTGACTTGGGAGTTCCCCGTTCATTCTGGTTTCACTTATATGGTCAGGCTCCACTTTTGCGAACTTGACTCCAATATTAATGACATCAGTGACAGGGTATTCTTCATTTACATAGCAAGCCAGTTGGCTGATGATCGCGCTGATGTTATGAAATGGACTCAGAAACAGAAAGGTCTCGCTGTGTACAAAGACTACGCCATTTTGATTCTCAAGAATGATACTCAGAAAAAGGTTAATCTCTCGCTCCAATTACATCCTTATGAAAGTGGTAGGGATACGAAATACAGTGACCCGTTCTTGAACGGTCTCGAGATCTTCAAAATCAGTGACACTTTGTCTAACAATCTCGCCGGACCTAACCCAGTCCCGGTTCAGTCTCCACTTAGCAACATGCCTGTCCAAAAGGGAAAGAATAGAAGCAGAACACTGATAATTCATGTCGTGGTGGGGGTAGTATCCGGCGTCGTTTTGATCTCGCTTGTCGTTTTCTTTGTCGTGTTGTCCAAGTGGAGTTCATACTCTTTCTCAAAGACCAAGTTAACCAACATGCAGAATTATTCTTTGCCATCCGATCTCTGCCGCCGCTTCTCGCTAATTGAGATCAAAGCCGCCACTAAAAACTTCAACGATGCCTTCATCATTGGTGCTGGGGGATTTGGCAACGTGTACAAGGGCTACATCAATGACTGTTCTACCGTTGTCGCCATCAAACGCCTCAAAGCGGGTTCACAGCAGGGGGCTCACGAGTTCATGAACGAGATTGAGATGCTCTCGCAGCTCCGCCACCGCCATCTCGTCTCACTCATCGGATATTGCAGCGATAACAATGAGATGATCCTGGTTTACGATTTCATGGCACGTGGCAACCTTCGAGACCATCTCTATGATACCGATAAACCTACTCTCTCATGGAAGGAACGCTTGCGAATTTGCATTGGCGCTGCGCGTGGGCTACGTTATCTTCACAGTGACGCGAAACAAAGGATCATCCACCGCGACGTGAAAACCACCAACATCTTGTTAGATGACAAGTGGGTCCCCAAGGTTTCGGACTTCGGCCTATCCAAGTTTGTGCCCAATGACATGTCCAAGGCCCATGTCAGCACCGCTGTGAAAGGAAGCTTTGGGTATTTAGACCCGGAGTATTGTATTCGGCACCGTTTAACAGAGAAATCTGATGTGTATTCTTTTGGGGTAGTGCTGTTTGAGATACTGTGTGCTCGTCCGCCTCTGATCCACACTGAGGAGACTGAACAGTTGTCACTAGCTAATTGGGCCAGGTACTGTTACCAAAATGGGACCGTGGCACATATTGTGGACCCCATTTTGAAGGGGAAGATTGCACCCGAGTGCTTCACGAAGTTTTGTGAGATTGGGATAAGTTGTTTGTTACATGATGGCACGCAGAGGCCATCTATGAATGACGTCGTTTCGATGCTGGAGTCTGCGCTGAAACTGCAAGAGAGTGCGGAGCAATGCGAACATGCTGATAATTTTACCCAGGGAGTTCAGGAAAAAATAGAGGAAGATAGTGACACTGTTTAA 2451 0.4639 MRFNSITSVTLFLFLHLFTHLQAYTPENNFTISCGATEKSFDGERTWTGDTETEYSMLLSSQDGTVSAKPTNPSTNQVPYTAARLSRSQFSYSFLVTGGPKFVRLFFYPTSYPSFPRTDASFTVQSNQFVLLHDFNASLNADAENKETIFREYVIYVNDGERLILTFTPSQPNSYAFINGIEVISMPSNLYYTSPDDTGFKLVGSDTLYSIKTRFALETEYRINVGGQEISPQNDTNLFREWFGQDEDFLIKNNPQNNDLPADLDGKMNITVIVNPDHVAPKELYRTARDMGTNATLNKISNLTWEFPVHSGFTYMVRLHFCELDSNINDISDRVFFIYIASQLADDRADVMKWTQKQKGLAVYKDYAILILKNDTQKKVNLSLQLHPYESGRDTKYSDPFLNGLEIFKISDTLSNNLAGPNPVPVQSPLSNMPVQKGKNRSRTLIIHVVVGVVSGVVLISLVVFFVVLSKWSSYSFSKTKLTNMQNYSLPSDLCRRFSLIEIKAATKNFNDAFIIGAGGFGNVYKGYINDCSTVVAIKRLKAGSQQGAHEFMNEIEMLSQLRHRHLVSLIGYCSDNNEMILVYDFMARGNLRDHLYDTDKPTLSWKERLRICIGAARGLRYLHSDAKQRIIHRDVKTTNILLDDKWVPKVSDFGLSKFVPNDMSKAHVSTAVKGSFGYLDPEYCIRHRLTEKSDVYSFGVVLFEILCARPPLIHTEETEQLSLANWARYCYQNGTVAHIVDPILKGKIAPECFTKFCEIGISCLLHDGTQRPSMNDVVSMLESALKLQESAEQCEHADNFTQGVQEKIEEDSDTV 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02402 816 CDD STKc_IRAK 516 783 - -
Pumo2g02402 816 FunFam Receptor-like protein kinase FERONIA 482 586 - -
Pumo2g02402 816 Pfam Protein tyrosine and serine/threonine kinase 516 782 IPR001245 GO:0004672|GO:0006468
Pumo2g02402 816 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Pumo2g02402 816 Gene3D Transferase(Phosphotransferase) domain 1 587 810 - -
Pumo2g02402 816 Pfam Malectin-like domain 32 410 IPR024788 -
Pumo2g02402 816 Gene3D - 26 187 - -
Pumo2g02402 816 Gene3D - 216 411 - -
Pumo2g02402 816 PANTHER OS03G0124300 PROTEIN-RELATED 8 476 IPR046957 GO:0004672
Pumo2g02402 816 ProSiteProfiles Protein kinase domain profile. 510 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02402 816 FunFam Receptor-like protein kinase FERONIA 587 803 - -
Pumo2g02402 816 SUPERFAMILY Protein kinase-like (PK-like) 494 786 IPR011009 -
Pumo2g02402 816 FunFam FERONIA receptor-like kinase 215 411 - -
Pumo2g02402 816 SMART serkin_6 510 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02402 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Pumo2g02402 816 Gene3D Phosphorylase Kinase; domain 1 470 586 - -
Pumo2g02402 816 FunFam FERONIA receptor-like kinase 29 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02402 Pumo-Chr2 51915124 51918528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02402 24 794 Receptor kinase-like Gene Family AT3G51550 49.071 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02402 Malectin_like 6.6e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02402 - - gsj:114381619 1120.15