Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02401 ATGAGGTTCAACAGTATCTCCTCCGTGACACTCTTCCTCTTTCTCCACCTCTCTACACACCTCCAAGCGTACACTCCAGTGGACAATTTCACCATCAGTTGCGGTGTCACCGGAAAATCCTTTGATGGCGAAAGGACATGGATGGGAGACACAAAGACAGAGTACTCGATGCTCCTATCTAATGAAGATGGCACCATTTCCGCTAAACCAACAAATCCTTCTACCAATCTAGTCCCCTATACCGCAGCTCGTCTTTCTCGTTCCCAATTCAGTTACTCTTTCCTCATCACCACGGGCGGTCCCAAATTCGTTCGTCTCTTCTTCTACCCAGCTTCTTACCCTTCCTTCCCCCGCACAGATGCCTCCTTCACAGTTCAATCCAATCAATTCTTTCTCCTCCACGGTTTCAACGCTTCTTTAAATGCTGATGCTGAAAACAAGGAAACCATCTTCAGAGAATACGTCATCCATGTGGACGACGATCAGAGTCTTATTCTCACCTTCACTCCGTCACAACCAAACTCCTATGCTTTCATCAATGGAATCGAGGTAATTTCCATGCCACCCGACCTGTATTACACGTCAGCAAATGACATGGAATTCAAGTTGGTGGGAAGTAACACTCTGTACAGCTTAGGAACCACCTTTGCGCTTGAGACAGAGTATAGAATCAAAGTCGGAGGGCAAGAAATCTCGCCACTAAACGACACCGCTGATTTGGATGGTAAGATGAACATAACCGTGAATCCTGATCACATGGCACCCAAGGAACTGTACAGAACAGCACGTGACATGGGCACAAACGCCACTCTAAACAAAATCAGCAACCTTACTTGGGAGTTCCCCGTTCATTCTGGTTTCACTTATATGGTCAGGCTCCACTTTTGCGAACTTGACCCCAATATTAATGACATCAGTGACAGGGTGTTCTTCATTTACATAGCGAACCAGTTGGCTGATGATCGTGCTGATGTTATGAGATGGACCCAGAAACAGAAAGGTCTCGCTGTGTACAAAGACTATGCCGTTTTGGTTCCCCAGAATAATACTCAGAAAAAGGTTAATCTCTCGCTTCAAATGCATCCTCAAATTGAGGATAGAACATTATACAGTGACCCATTCTTGAACGGTCTGGAGATCTTCAAAATCAGCAATGTTGGGTCTAACAACCTTGCCGGACCTAATCCAGACCCGGTTCAGACACCACTTAGCAGCGGGTCCGTCCAAAAGGGAAAGAACAGAAGCAAAACACTGATAATTGGTATTGTCACGGGGGTGGTATCTGTGGTCGTTTTGATTTCACTTTTCGTTTTCATTGTCGTGTTGTCACCGACTTCCAAGTGGGGTCGACTCTCGTCATCAACGACCAAGTCAACCAACACGCAGAATTGTTCTCTGCCATCCAATCTCTGTCGCCGCTTCACCCTCAATGAGATCAGAGCTGCCACCAAAAACTTCAACAATGTCTTCATCGTCGGTGTCGGGGGATTCGGCCATGTCTACAAGGGCTACATTGACGGTGGTTCCATCCCTGTCGCCATCAAGCGCCTCAGACCGGGTTCGCAACAAGGGGCCCAGGAGTTCATGAATGAGATCGAGATGCTCTCCCAACTCCGCCATCGCCATCTCGTGTCACTCATCGGTTATTGTAGCGATAAGAACGAGATGATCTTGGTCTACGATTTTATGGCACGTGGCAACCTCTGTGACCATCTCTATGACACCGATAATCCCCCTCTCTCATGGAAGCAACGATTGCGTATTTGCATTGGCGCTGCGCGCGGGCTACGTTATCTTCACAGTGACGCAAAGCACATGATCATCCACCGTGACGTGAAAACCACCAACATCTTGTTGGATGAGAAGTGGGTGGCCAAGGTTTCAGACTTCGGCCTATCCAAGTTTGGGCCCAATGACACGTCCAAGGCCCATATCAGCACCGCTGTGAAAGGCAGCTTTGGGTATTTAGACCCTGAGTATTTTATTCGGCAGCGTTTAACAGAAAAGTCTGATGTGTACTCTTTCGGGGTAGTGCTATTTGAGATATTGTGCGCTCGTCCGCCTCTGATCCACACTATAGAGATTGAGCAGTTGTCCCTTGCTAATTGGGCCAGATATTGTTACCAAAATGGGACTGTGGCACAGATTGTGGACCCCATTTTGAAGGGGAAGATTGCGCCCGAGTGCTTCAAGAAGTTTTGTGAGATTGGGGTGAGTTGTTTGTTACACGACGGGACGCAGAGGCCATCGATGAACGAAGTCGTTTCGATGTTGGAGTCTGTGCTGAAACTGCAAGAGATTGCGGAGCAATGCGAACATGCTGATATTGTTACCCAGGGAGTTCAAGAAGAAATACAGGAAGATAGTGACGATGTGTTTAACAAAGGAGAGTACGACCATGGTTACAAGGACAGTGATAAGTTGCTTGTCTGA 2433 0.4743 MRFNSISSVTLFLFLHLSTHLQAYTPVDNFTISCGVTGKSFDGERTWMGDTKTEYSMLLSNEDGTISAKPTNPSTNLVPYTAARLSRSQFSYSFLITTGGPKFVRLFFYPASYPSFPRTDASFTVQSNQFFLLHGFNASLNADAENKETIFREYVIHVDDDQSLILTFTPSQPNSYAFINGIEVISMPPDLYYTSANDMEFKLVGSNTLYSLGTTFALETEYRIKVGGQEISPLNDTADLDGKMNITVNPDHMAPKELYRTARDMGTNATLNKISNLTWEFPVHSGFTYMVRLHFCELDPNINDISDRVFFIYIANQLADDRADVMRWTQKQKGLAVYKDYAVLVPQNNTQKKVNLSLQMHPQIEDRTLYSDPFLNGLEIFKISNVGSNNLAGPNPDPVQTPLSSGSVQKGKNRSKTLIIGIVTGVVSVVVLISLFVFIVVLSPTSKWGRLSSSTTKSTNTQNCSLPSNLCRRFTLNEIRAATKNFNNVFIVGVGGFGHVYKGYIDGGSIPVAIKRLRPGSQQGAQEFMNEIEMLSQLRHRHLVSLIGYCSDKNEMILVYDFMARGNLCDHLYDTDNPPLSWKQRLRICIGAARGLRYLHSDAKHMIIHRDVKTTNILLDEKWVAKVSDFGLSKFGPNDTSKAHISTAVKGSFGYLDPEYFIRQRLTEKSDVYSFGVVLFEILCARPPLIHTIEIEQLSLANWARYCYQNGTVAQIVDPILKGKIAPECFKKFCEIGVSCLLHDGTQRPSMNEVVSMLESVLKLQEIAEQCEHADIVTQGVQEEIQEDSDDVFNKGEYDHGYKDSDKLLV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02401 810 Pfam Malectin-like domain 32 383 IPR024788 -
Pumo2g02401 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pumo2g02401 810 FunFam Receptor-like protein kinase FERONIA 458 562 - -
Pumo2g02401 810 FunFam FERONIA receptor-like kinase 238 384 - -
Pumo2g02401 810 SMART serkin_6 486 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02401 810 ProSiteProfiles Protein kinase domain profile. 486 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02401 810 Gene3D Phosphorylase Kinase; domain 1 447 562 - -
Pumo2g02401 810 CDD STKc_IRAK 492 759 - -
Pumo2g02401 810 Gene3D Transferase(Phosphotransferase) domain 1 563 785 - -
Pumo2g02401 810 FunFam FERONIA receptor-like kinase 29 188 - -
Pumo2g02401 810 FunFam Receptor-like protein kinase FERONIA 563 779 - -
Pumo2g02401 810 PANTHER OS03G0124300 PROTEIN-RELATED 9 452 IPR046957 GO:0004672
Pumo2g02401 810 Pfam Protein tyrosine and serine/threonine kinase 492 758 IPR001245 GO:0004672|GO:0006468
Pumo2g02401 810 ProSitePatterns Protein kinases ATP-binding region signature. 492 515 IPR017441 GO:0005524
Pumo2g02401 810 Gene3D - 216 384 - -
Pumo2g02401 810 Gene3D - 29 187 - -
Pumo2g02401 810 SUPERFAMILY Protein kinase-like (PK-like) 471 765 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02401 Pumo-Chr2 51907816 51910514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02401 24 770 Receptor kinase-like Gene Family AT3G51550 49.375 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo2g02401 Malectin_like 1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02401 - - gsj:114381619 1087.79