Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02399 ATGACGACGCAACCACCTTTCAAAGTAATCCAAGTTTGTTCGGTGGCACCGCTTCAAGATTCAACCCCTTCCACCGTTGTTCCAACCTCTCTTCCACTAACCTTCTTCGATCTCTTATGGCTACGCTTTCCACCCGTTGAGCGTCTCTTCTTCTATTCCTTCCCACACCCCACCTCTTCATTTCTTCACTCCCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTCCTCCCTTTCGCTGGCACCCTCACTTGGCCCTCTCACTCTCCCAAACCCATCATCAACTATGTCCCCGGCGACGCCGTTTCCTTCACTATTGCCGAGTCCAACGAAAACTTCAATGATCTCACTTCTCATCTCTGTGAAGCAGCGAAACGACACCGTTTGATACCCCACTTAACCACTTCCCATGATAAAGCATCTGTGCTGGCACTGCAAGTAACTGTGTTCCCAAACACTGGCTTTTGCATTGGAATAACCACACACCATGCAGCCTTCGACGGAAAATCTTCAACCATGTTCATCAAATCATGGGCCTATATATGCTCTAACCTTCAAAACCCTACACCAACACCATCCTTATCGTTACCTCAGCATCTCACACCTTTCTTTGACAGATCAGTGATAAGAGACCCTTCTGGAATTCGCTGA 651 0.4793 MTTQPPFKVIQVCSVAPLQDSTPSTVVPTSLPLTFFDLLWLRFPPVERLFFYSFPHPTSSFLHSLKHSLSLTLQHFLPFAGTLTWPSHSPKPIINYVPGDAVSFTIAESNENFNDLTSHLCEAAKRHRLIPHLTTSHDKASVLALQVTVFPNTGFCIGITTHHAAFDGKSSTMFIKSWAYICSNLQNPTPTPSLSLPQHLTPFFDRSVIRDPSGIR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02399 216 Pfam Transferase family 27 193 - -
Pumo2g02399 216 Gene3D - 7 216 IPR023213 -
Pumo2g02399 216 PANTHER - 8 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02399 Pumo-Chr2 51875592 51876242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02399 18 210 Monolignol Biosynthesis Gene Families AT5G48930 31.034 3.04e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02399 - - gmx:100800849 359.762