Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02397 ATGGCCTCCTCCGAGATTAACTGGGACAGGCTAGATAAAACGAAGTTCTATGTCGTGGGAGCAGGACTCTTTACGGGTATTACACTGGCACTCTATCCGGTTTCTGTTGTGAAGACCAGGCTGCAGGTTGCCTCAAAGGATACTTTGGAGAGAAGTGCGTTGTCAGTAGTGAAAGGGTTACTTAAAACGGATGGCATCCCAGGTTTGTATAAAGGGTTTGGTACAGTTATCACTGGCGCGATTCCTACCAGAATCTTATTCCTCACTGCCTTGGAGACGACGAAGGTGGCTTCCTTCAGGATGCTGGAGCCATTTAGACTATCTGAAACTACTCAGGCTGCCATAGCAAATGGAGTTGCAGGCATGGCATCATCATTTGTCGCACAAGCTGTGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGTGGGGGTTTGGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATCAGGGGATTATATAGAGGATTTGGTCTATCTGTCATGACTTATGTACCATCTAATGCTGTATGGTGGGCAAGTTATGGTTCAAGTCAACGCTACTTATGGAGATTCGTGGGAGATAACTCCAGTGAGGAAGGTACTCGTAGTCTACCAAAGATTATTTTTGTTCAGGCTAGTGGAGGGATCATTGCTGGTGCTACTGCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGGCTACAGGTGACGGGACTTGAAAAGAAAATCTCTGTAAAACAAGTTGTTAAAGATTTGATCGTTGAGGATGGTTGGAAAGGTGTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGACGAAGGGGCAATTGATCTGTAA 945 0.4476 MASSEINWDRLDKTKFYVVGAGLFTGITLALYPVSVVKTRLQVASKDTLERSALSVVKGLLKTDGIPGLYKGFGTVITGAIPTRILFLTALETTKVASFRMLEPFRLSETTQAAIANGVAGMASSFVAQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYVPSNAVWWASYGSSQRYLWRFVGDNSSEEGTRSLPKIIFVQASGGIIAGATASCITTPLDTIKTRLQVTGLEKKISVKQVVKDLIVEDGWKGVYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEGAIDL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02397 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Pumo2g02397 314 SUPERFAMILY Mitochondrial carrier 9 301 IPR023395 -
Pumo2g02397 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Pumo2g02397 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 309 - -
Pumo2g02397 314 Gene3D Mitochondrial carrier domain 14 311 IPR023395 -
Pumo2g02397 314 Pfam Mitochondrial carrier protein 114 202 IPR018108 -
Pumo2g02397 314 Pfam Mitochondrial carrier protein 224 308 IPR018108 -
Pumo2g02397 314 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Pumo2g02397 314 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Pumo2g02397 314 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Pumo2g02397 314 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Pumo2g02397 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 304 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02397 Pumo-Chr2 51863907 51868825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02397 6 309 Chloroplast and Mitochondria Gene Families AT5G15640 73.616 1.93e-165 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02397 K15121 - gmx:100819519 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02397 2 51863907 51868825 Pumo5g00685 5 13369787 13375355 PCT