Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02396 ATGCTTTTCCGTTCCAGCTTCACCCCCACGATCCGATCCTTCCTCAAACACCCTCCATGCATTCTACTTTTGCTTCTTTTCTCTTTCACGTGCTTCACTTCCACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGTTATGTTGCTGTTGTTACAATGAACAATTTCCAACAATATCGCCATATCTCAGCGCCTGGGTGGTCGCTAGGATGGTCATGGGCAAAGAAGGAGGTAATATGGAGCATGGTGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAGGGAAACATCCCACATTGCTGTAAAAAGAACCCTATAGTTGTAGATTTACTTCCCGGAACACCTTACAACCAACAAATTGCAAACTGCTGCAAAGGTGGTGTACTCAGCTCATGGGGGCAGGATCAATCCAAGGCGGTTGCGGCATTTCAAGTCAGTGTAGGTAGTGCTGGTACAACTAACAAAACTGTCAAACTACCAGAAAATTTCACCTTGAATGCACCAGGACCGGGTTACACATGTGGGCCGGCAAAAATTGTTGAACCAACTCAATTCATACAACCAGACAAAAGGAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCTCATATTCACAATTTCTTGCTCAGACAACACCCAGTTGCTGCGTCTCACTCTCATCTTTCTATAACGATACTGTTGTACCCTGCTCTACATGTGCATGTGGCTGCCAAGGCAACTCATCTCAATCAGGGGAATGTGTAGATCCAGATTCACCACATTTGGCATCAGTTCTTTCCAACCCTGGACCTGGAAAGAGTAGTATTCTGCCTTTGGTTCGATGTACTCGTCATATGTGCCCAATCCGAGTTCACTGGCACATCAAGCTCAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAACTTCAATTACAGGATGAATTATTCTGATTGGAACTTGGTTATTCAACATCCAAACTTTGACAATCTGACCCAACTATTCAGTTTCAACTACAAAGCAATATCTCCCTACGGGTCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTAGCCCTCTTGGTAATGTGCAGTCAGAGCTACTATTCAGAAAGGACAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGAAGAGTCTATTTCAATGGTGATGTTTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCCAGGCATGAGGTTTCTCTGCTTGCTTTGGTGATGACCTCTTTGGTAGCTTTGGTATTATATGCATATGCTTAA 1377 0.4379 MLFRSSFTPTIRSFLKHPPCILLLLLFSFTCFTSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHISAPGWSLGWSWAKKEVIWSMVGGQTTEQGDCSKYKGNIPHCCKKNPIVVDLLPGTPYNQQIANCCKGGVLSSWGQDQSKAVAAFQVSVGSAGTTNKTVKLPENFTLNAPGPGYTCGPAKIVEPTQFIQPDKRRVTQALMTWNVTCSYSQFLAQTTPSCCVSLSSFYNDTVVPCSTCACGCQGNSSQSGECVDPDSPHLASVLSNPGPGKSSILPLVRCTRHMCPIRVHWHIKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFDNLTQLFSFNYKAISPYGSINDTAMLWGVKFYNDFLMQASPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRHEVSLLALVMTSLVALVLYAYA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02396 458 PANTHER PROTEIN COBRA 26 448 IPR006918 GO:0010215|GO:0016020
Pumo2g02396 458 PIRSF COBRA 12 458 IPR006918 GO:0010215|GO:0016020
Pumo2g02396 458 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02396 Pumo-Chr2 51850811 51855755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02396 21 456 COBRA Gene Family AT3G02210 72.936 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02396 - - gmx:100797383 887.1