Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02371 ATGAGTAATGGAAGTTTGGCAAATCTTTTATATGGTGAAGAAAAGGAATTGAGTTGGGATCAAAGGCTGCAAATTGCTCTTGATATTTCACAGGGAATAGAATACCTTCATGAAGGAGCAGTCCCACCTGTCATACATCGCGATTTAAAGTCAGCCAACATATTGCTAGATCACTCTATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGATCTTTGATGGCCGGAATTCCGGTCTCAAAGGTACATATGGCTACATGGATCCCGCATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTCGGTATCATAGTGTTTGAGCTCATCACTGCCATCCACCCACATCAGAATTTGATGGAATATGTTAACCTTGCTGCAATGGATCATGATGGTGTAGATGAGATACTTGACAAGCAACTTGTTGGAAAGTGCAATCTTGAAGAAGTGAGGCAGCTTGCTAAAATTGGACACAAATGCTTGCACAAATCACCTAGGAAACGCCCCTCTGTAGGTGAAGTTTCACAGTTTATATCAAGAATAAAGCAAAGGCGACAGCGCCGTCTAACAGAAGATAACTTGTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGGTTAGAAGATCGACAGGTTGAACTAAGTAGGATGTCAACCATTAACCTCACAGAAACTGTATGA 702 0.4145 MSNGSLANLLYGEEKELSWDQRLQIALDISQGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPAYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKIGHKCLHKSPRKRPSVGEVSQFISRIKQRRQRRLTEDNLSFASNNFSRAVSRLEDRQVELSRMSTINLTETV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02371 233 Pfam Protein kinase domain 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02371 233 PIRSF ILK 1 202 - -
Pumo2g02371 233 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02371 233 Gene3D Transferase(Phosphotransferase) domain 1 1 211 - -
Pumo2g02371 233 SUPERFAMILY Protein kinase-like (PK-like) 1 198 IPR011009 -
Pumo2g02371 233 PANTHER OS01G0750732 PROTEIN 1 204 - -
Pumo2g02371 233 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 1 210 - -
Pumo2g02371 233 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02371 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02371 Pumo-Chr2 51144660 51146712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02371 1 180 Receptor kinase-like Gene Family AT2G21480 44.792 4.93e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pumo2g02371 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02371 - - gmx:100819995 451.825