Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02360 ATGACAATTGGAAGTCTTGAACATAAGGCAAAGACGACAAAATCAAGGAAGAACAAAGTAGTTGTTGATGAGAAGGCACCTTTGATACCTAAGACTTATGAGGCTGATGCTGCAGGGTTTGATGAATTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAACTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATCAGGATTTCCCGGGCAGGGAATCTTTCTTCTTATGGGAATCTCGTGGGGGATTCATTTGGCAAATTCGGAAAAGCTCTGGTGCAGATATGTGTTGTAATCAACAACGTTGGAATGCTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCTAGTGGAATTCATCATTCTGGTGTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGACGTACATTTATTCTTCTTTTTACAACACTTGCTGTGTTTGCACCTTTGTCCTGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTTTTTCTTGTTATTGCTGTGGGAATCTCAATTTTCAAGATTGCAATTGGAGGCATTGGGATGCCTAGACTCCTCCCGATCATTACCAATGTAAACTCAGTTTTTGAACTGTTCACTGTAGTTCCTGTGGTTGTGACAGCCTATCTATGCCACTTCAATGTTCACAGCATAGATAATGAACTTGAGGACTCCTCACAAATACACGGGATTGTGCGTACTTCCCTTTCTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCCGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTATTTCCAGTTGTGTTCTATGCAGTGAGGATCAACCTTGATGGTCTCATATTTCCATCAGCTAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTATTGCCCTTATTGGTGTTGCCTTTTTGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGCATGTTTAGCATTCATATTTCCAGCTTCCATCACCCTTAGGGATCGGTACAACATTGCAACTAGAAAAGACAAGATTCTATCTGTCTTTATGATAGTCCTCGCAGTCTTCGCGAATGTCGTGGCTATATACAGTGATGCCTTTTCCTTGATCAAAAACAGTATAACTAAAGTTCACCTGACTCATAAATGTAAAATAGAGTGTTGGCTGAACGACTTAAGGGGCGTGCTGTAA 1449 0.4113 MTIGSLEHKAKTTKSRKNKVVVDEKAPLIPKTYEADAAGFDEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKSIGFMIRISRAGNLSSYGNLVGDSFGKFGKALVQICVVINNVGMLIIYMIIIGDVISGTSSSGIHHSGVLEGWFGVHWWTGRTFILLFTTLAVFAPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIAIGGIGMPRLLPIITNVNSVFELFTVVPVVVTAYLCHFNVHSIDNELEDSSQIHGIVRTSLSLCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFPSARPLVLDNFRFASITIALIGVAFLGANFIPSIWDIFQFTGATAAACLAFIFPASITLRDRYNIATRKDKILSVFMIVLAVFANVVAIYSDAFSLIKNSITKVHLTHKCKIECWLNDLRGVL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02360 482 PANTHER AMINO ACID TRANSPORTER 44 445 - -
Pumo2g02360 482 Pfam Transmembrane amino acid transporter protein 46 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02360 Pumo-Chr2 50848888 50854629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02360 21 458 Amino Acid or Auxin Permease AAAP Family AT5G38820 64.318 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02360 K14207 - gmx:100785277 811.216