Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02358 ATGATCACAGGTGACAATGTTTTCACTGCAAAGGCTATAGCAACTGAATGCGGCATACTTCGGCCTGATCAGGACACAGTTGGAGCAGTGGTTGATGGAGAGGAATTTCGCAACTACACACCTGAAGAGAGGTTGGAGAAGGTGGACAAAATTTGTGTGATGGCAAGATCTTCACCTTCTGACAAACTTCTAATGGTTAAATGCCTAAAGCAGAAAGGCCATGTAGTCGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAGGAAGCTGATATTGGACTCTGTATGGGAATTCAAGGTACTGAAGTGGCCGAAGAGAACTCAGGTATTGTTATATTGGATGGCAATTTTAAATCTGTAGTTACTGCCGTAAAGTGGGGAAGAAGTGTTTACATCAACATCCAGAAGTTTGTTCAGTTTCAATTGGCAATGATTGTGGCAGCACTTGTAATCAACATTGTAACTGCAGTATCAACAGAGGAAGTACCACACACAGCTGTGAAATCATTATGGATGAACTTGATCATGGACACATTGGGTGCTTTGGCTCTTGTAACAAATAAGCCCACCAAGGAGTTGATGGAGGAACCGCCGATAGATAGAGCAAAATCTCTCATAACTAATGTCATGTTGAGGAATCTATTAGTTCAAGCTTTGCATCAGATAGCAGTTTCGCTGTTTCTTCAATTTAGAGGTAAGTCTATCCTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAGTACATTTGTTCTCTGCCAAGTGTTCAATCAGTTCAATGCCAGAGAGATGGAGAAGGAGAATGTTTTCAAAGGCATACACAGGAGCATGTTATTTCTAGGCATTATTGGCATCACAATATTCCTTCAGGTGATGATGGTCGAGTTTCTCAACAAATTTGCTGATACAGAGAAGCTAACTTTGAAGCAATGGGCTATTTGCATCTGTCTAGCTTATTTTTCCTTGCCATTTGCTGTGTTTGGGAAGTGGATTCCTGTCCCGGATAAACCAGTACTCAATTTTTGA 1035 0.4164 MITGDNVFTAKAIATECGILRPDQDTVGAVVDGEEFRNYTPEERLEKVDKICVMARSSPSDKLLMVKCLKQKGHVVAVTGDGTNDAPALKEADIGLCMGIQGTEVAEENSGIVILDGNFKSVVTAVKWGRSVYINIQKFVQFQLAMIVAALVINIVTAVSTEEVPHTAVKSLWMNLIMDTLGALALVTNKPTKELMEEPPIDRAKSLITNVMLRNLLVQALHQIAVSLFLQFRGKSILGVTSGVNDTLIFSTFVLCQVFNQFNAREMEKENVFKGIHRSMLFLGIIGITIFLQVMMVEFLNKFADTEKLTLKQWAICICLAYFSLPFAVFGKWIPVPDKPVLNF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02358 344 PANTHER CATION TRANSPORTING ATPASE 1 336 - -
Pumo2g02358 344 Pfam haloacid dehalogenase-like hydrolase 1 93 - -
Pumo2g02358 344 NCBIfam HAD-IC family P-type ATPase 52 159 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g02358 344 Gene3D - 125 325 - -
Pumo2g02358 344 PRINTS P-type cation-transporting ATPase superfamily signature 103 115 - -
Pumo2g02358 344 PRINTS P-type cation-transporting ATPase superfamily signature 79 98 - -
Pumo2g02358 344 Gene3D - 1 124 IPR023214 -
Pumo2g02358 344 FunFam Calcium-transporting ATPase 96 338 - -
Pumo2g02358 344 SUPERFAMILY Calcium ATPase, transmembrane domain M 129 336 IPR023298 -
Pumo2g02358 344 Pfam Cation transporting ATPase, C-terminus 167 334 IPR006068 -
Pumo2g02358 344 SUPERFAMILY HAD-like 1 183 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02358 Pumo-Chr2 50737012 50738046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02358 1 344 Primary Pumps ATPases AT3G63380 70.725 6.20e-166 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02358 K01537 - gmx:100793918 516.153