Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02354 ATGTCAATGATCACCTTAGAGCCCAATGAGGTACAGCTCAATGCCTCTAACACCATTAGCACAGTCGCTAAAAGATGGCTCTCTGTGTTGGTGACCATCTATTCGTTCCGAATCATTATGTCACGCTTCACACTCTTCAAAACAAACGAAAACAGAGCAAACCAGGTCTCACCAAGACCAAGACCATCTTTCAATTTGGCTTTGAACTCACACCATTCCATTAATATCGACTCAAACCCAACAGACCCAACAAGCCTTGCCAACCTTGTCAGAGATAAAGACCTTAAGAACCTTAACAACTTTGGTGGAGTTGAAGGCGTGGCTGAAGTCCTTAATATCCGCTTTGATCATGGCATCGACGGCGAAGATGCTGACAACATCAAACGTAGGAAACAAGAGCACGGTTCCAATACTCACAACAAAGCACCTTCCAAAGGATTCTTTGACTTCATAGTGGAAGCCTTTAAGGATGATATATATCTCACCATTTTCATCCTTATACTTTTTGCCTGTGCAGCTCTTTCCATCGGCTTTGGCATCAAGGAGCATGTTTGTTATTACTCTGGAGTAAGTTTTTTTGTTGCCATGTTGGTTGTCATTTCCCTGTCTCCAGTAAGTAAGTTTGTATTGAACAGACAATTTGGAAAGTTGTCTCTTGTTAACATTGACAGGCAAATAGATACAATGAGAAGTGGGAGGCGCCAACATATCTCAATATTTGATATCGTGGTTGGAGATATCATTTACTTGAAGATTGGAGACAGAGTGCCAGCAGATGGGTTATTTATTGAAATAGAAGGACATTCCCTTAAAGTGGATGAATCAATCTTCACAGGAGAAACTAATGATGTTGAAATTAATACAGGCAGCCACCCTTTTTTGTCTTCTGGCACCGTTGTGTCAGAGGGCTATGCTATGATGCTTGTTACTGCAGTTGGTATGAGCACCAAATGGGGTCAAATGATGAGTTCAATAAGCCTAGGTATTGATGAGCAAACTCCTTTGCAAAAAAAGTTAAACAAGCTCACATCATTCATTGGAAAGGTTGGTTGGATTCTGGATTTTTTTGTTGCTGTTGTTATGTTGGTTCGGTACTTCACAGGGAAAACAAAGAACAAGAATGGGGTTAGAGATTTCAATGGAAGCAAGACCAAGTTCCATAATATAATAAACACAGTTGTGAGAATTGTTGCTGATGCTGTTACCAGTGTTGCAATTCCTGGCGGTCTTCCTCTGGCTCTGAGTCTCACTCTGTCTTGTTCAATGAAGAAAATGATGGCTGATAGAGCATGTGAGACAATGGGTTCTGCCAGTGTTACAAATTGTGGTAGCAGAACCCAAGGGACGAGGAACTCTGTGGAAGCTTGCCAACATGCTGGTATGAATGTCAAAATTATCACAGGTGACAATTGTTTTCACTGTAGGTGGGAAAGAAGTGTTTACATCAACATCCAGAAGTTTGTTCAGTTTCAATTGACAATGAATGTGGCAGCACTTGTAATCAACTTTGTAGCAGCAATGTCAGCAGAGGAAGTGCCACACACAGCAGTAAAATCAGTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTAGCTCTTGCAACAGAAAAGCCCACCAAGGAGTTGATGGAGGAACCGCCGATAGATAGAGCAAAATCTCTCATAACTAATGTCATGTTGAGGAACATATTATTTCAAGCTTTGCACCAGATAGCAGTTTCTCTCTTTCTTCAATTTGGAGGTAAGTCTATCTTTCGTGTGACATCAGGGGTAAATGACACATTGATTTTCAATACATTTGTTCTCTGCCAAGTGTTCAATCAGTTCAATGCCCGAGAGATGGAGGAGAAGAATGTTTTCAAAGGCATACACAGGAGCAAGTTATTTCTAGGCATTATTGGCATCATAATATTCCTTCAAGTGATGATGGTCGAGTTTCTCAACAAATTTGCTGATACAGAGAAGCTAAATTTGGAGCAATGGGCTATTTGCATCGGTCTAGCTGCAATTTCCTTGCCAATTGGTTTGGTTGTGAAGTTTATTCCTGTCCCGGATAAACCATTATTCAATTTTTGA 2079 0.4079 MSMITLEPNEVQLNASNTISTVAKRWLSVLVTIYSFRIIMSRFTLFKTNENRANQVSPRPRPSFNLALNSHHSINIDSNPTDPTSLANLVRDKDLKNLNNFGGVEGVAEVLNIRFDHGIDGEDADNIKRRKQEHGSNTHNKAPSKGFFDFIVEAFKDDIYLTIFILILFACAALSIGFGIKEHVCYYSGVSFFVAMLVVISLSPVSKFVLNRQFGKLSLVNIDRQIDTMRSGRRQHISIFDIVVGDIIYLKIGDRVPADGLFIEIEGHSLKVDESIFTGETNDVEINTGSHPFLSSGTVVSEGYAMMLVTAVGMSTKWGQMMSSISLGIDEQTPLQKKLNKLTSFIGKVGWILDFFVAVVMLVRYFTGKTKNKNGVRDFNGSKTKFHNIINTVVRIVADAVTSVAIPGGLPLALSLTLSCSMKKMMADRACETMGSASVTNCGSRTQGTRNSVEACQHAGMNVKIITGDNCFHCRWERSVYINIQKFVQFQLTMNVAALVINFVAAMSAEEVPHTAVKSVWVNLIMDTLGALALATEKPTKELMEEPPIDRAKSLITNVMLRNILFQALHQIAVSLFLQFGGKSIFRVTSGVNDTLIFNTFVLCQVFNQFNAREMEEKNVFKGIHRSKLFLGIIGIIIFLQVMMVEFLNKFADTEKLNLEQWAICIGLAAISLPIGLVVKFIPVPDKPLFNF 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02354 692 Gene3D - 586 684 - -
Pumo2g02354 692 Gene3D - 302 585 - -
Pumo2g02354 692 Pfam Cation transporter/ATPase, N-terminus 102 175 IPR004014 -
Pumo2g02354 692 FunFam Calcium-transporting ATPase 455 686 - -
Pumo2g02354 692 SUPERFAMILY Calcium ATPase, transduction domain A 226 324 IPR008250 -
Pumo2g02354 692 Pfam Cation transporting ATPase, C-terminus 515 682 IPR006068 -
Pumo2g02354 692 SUPERFAMILY Calcium ATPase, transmembrane domain M 102 684 IPR023298 -
Pumo2g02354 692 Pfam E1-E2 ATPase 225 426 - -
Pumo2g02354 692 Gene3D - 203 301 - -
Pumo2g02354 692 PANTHER CATION TRANSPORTING ATPASE 79 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02354 Pumo-Chr2 50620069 50622147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02354 475 692 Primary Pumps ATPases AT3G22910 66.514 4.19e-88 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02354 K01537 - gmx:100793918 476.863