Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02348 ATGCAAACCAGGGAAGTCTCAGCAGGCCTCAATTATTTACTCCCTTCAAACCCTTGTCCCTACCCTCCCAACAACTACACCACCATGAATATCCAAAACAACATTCCCACATTTCATCAGTTCCAAAGATTCCCCAACCAACTATATGGCTACAACAACAGCAACAACAACATTCTCAACAACCCTCCCTATGACTTCAGCCCTCAATCCTCATGCATCAGCAGCAACTCCACCTCTGATGAGGCAGATGAGCAGCAGCTGAGCCTCATCAACGAGAGGAAGCACCGGAGGATGATATCGAACCGCGAATCGGCGCGCCGGTCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCTCAGGTGGTGTGGCTCAGGAATGAGAACCACCAGCTCATAGACAAGCTGAACCATGTCTCAGAGAACCATGACCAAGTTCTCCAAGAGAATGCTCAGCTCAAAGAGGAAGCCTCAGAGCTTCGCCAAATGATTAGGGACATGCAGATACACAGCCCTTGCCCTTCCTCCTTCACCCCTTTGGAAGATGATGTTGATGTTGATGTTGATGTTCCCTCAGCTTATCTCAGATCTGATTCTTCAAACCAATCCAACTCATGTAATAACAACAACAACGACAACATGGACCTCCTTGGCTGA 660 0.4848 MQTREVSAGLNYLLPSNPCPYPPNNYTTMNIQNNIPTFHQFQRFPNQLYGYNNSNNNILNNPPYDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSENHDQVLQENAQLKEEASELRQMIRDMQIHSPCPSSFTPLEDDVDVDVDVPSAYLRSDSSNQSNSCNNNNNDNMDLLG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02348 219 CDD bZIP_plant_GBF1 94 145 IPR045314 GO:0003700|GO:0006355
Pumo2g02348 219 Pfam bZIP transcription factor 93 151 IPR004827 GO:0003700|GO:0006355
Pumo2g02348 219 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 96 111 IPR004827 GO:0003700|GO:0006355
Pumo2g02348 219 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 91 154 IPR004827 GO:0003700|GO:0006355
Pumo2g02348 219 Coils Coil 137 171 - -
Pumo2g02348 219 Gene3D - 91 146 - -
Pumo2g02348 219 SMART brlzneu 89 153 IPR004827 GO:0003700|GO:0006355
Pumo2g02348 219 FunFam BZIP transcription factor 91 143 - -
Pumo2g02348 219 SUPERFAMILY Leucine zipper domain 93 143 IPR046347 GO:0003700|GO:0006355
Pumo2g02348 219 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 177 IPR044521 -
Pumo2g02348 219 MobiDBLite consensus disorder prediction 196 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02348 Pumo-Chr2 50548043 50549132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02348 19 185 bZIP Transcription Factor Family AT3G30530 59.412 7.64e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo2g02348 bZIP_1 2.7e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02348 - - gmx:100791105 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02348 2 50548043 50549132 Pumo5g00642 5 12454634 12455494 PCT