Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02342 ATGATCACAGGCGACAATGTTTTCACTGCAAAGGCTATAGCAACCGAATGCGGCATACTTCAGCTTGATCAGGACACAGATGAAGCAGTGGTTGAAGGAGAAGAATTTCGCAACTACACACCTGAAGAGAGATTGGAAAAGGTGGACAAAATTTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTAAAGCAGAAAGGCCATGTGGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTGAAAGAAGCTGATATTGGACTTTCTATGGGAATTCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGATATTGTTATATTGGATGACAGTTTTGCATCTATAGTCACTGTCTTAAGGTGGGGAAGATATGTTTACAACAGCATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTGGCAGCACTTGCAATCAACTTTGTGGCAGCTGTGTCAGCTGGAGAAGTGCCACTAACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACAATGGAGTTGATGGACAAACCACCAGTAGGTAGAACAAAACCTCTGATTACTAATGTCATGTGGAGGAACCTATTGGCTCAAGCTTTGTACCAAATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAACACATTTGTTCTTTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGGATTATTGGCATAACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTTAAGAAATTTGCTGACACAGAAAGGCTAAATTGGGGGCAATGGGGTGTTTGCATCGGTCTAGCTGCAGTTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGATAAACCATTGCTCAATTTTTTGAGCATGAAGAAATAA 1050 0.42 MITGDNVFTAKAIATECGILQLDQDTDEAVVEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDSFASIVTVLRWGRYVYNSIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGVCIGLAAVSWPIGWVVKLIPVPDKPLLNFLSMKK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02342 349 Gene3D - 125 333 - -
Pumo2g02342 349 SUPERFAMILY HAD-like 1 184 IPR036412 -
Pumo2g02342 349 Pfam Cation transporting ATPase, C-terminus 164 334 IPR006068 -
Pumo2g02342 349 SUPERFAMILY Calcium ATPase, transmembrane domain M 129 336 IPR023298 -
Pumo2g02342 349 FunFam Calcium-transporting ATPase 96 338 - -
Pumo2g02342 349 PANTHER CATION TRANSPORTING ATPASE 1 336 - -
Pumo2g02342 349 Pfam haloacid dehalogenase-like hydrolase 1 93 - -
Pumo2g02342 349 PRINTS P-type cation-transporting ATPase superfamily signature 103 115 - -
Pumo2g02342 349 PRINTS P-type cation-transporting ATPase superfamily signature 79 98 - -
Pumo2g02342 349 Gene3D - 1 124 IPR023214 -
Pumo2g02342 349 NCBIfam HAD-IC family P-type ATPase 52 160 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02342 Pumo-Chr2 50324259 50325308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02342 1 345 Primary Pumps ATPases AT3G63380 79.480 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02342 K01537 - gmx:100793918 650.588