Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02341 ATGACAAATGAGTCATCTTCTTTTTTATTACAAGGACTTGTGGGGATTAAGGATCCATGTCGTCCAGGCGTGAAGAATGCTGTGGAAGCTTGCCAAAATGCTGGTGTCAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCTATAGCAACAGAATGTGGCATACTCTGGCCTAATCAGGACACAACTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACCTGAAGAGAGGTTGGAGAAGGTGGACAAAATCTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTAAAACAAAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGGTGGGGAAGGTGTGTTTATAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTAGCAGCACTTGCAATCAACTTTGTGGCAGCAGTGTCAGCTGGAGAAGTGCCACTAACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACCATGGAGTTGATGGACAAACCACCAGTTGGTAGAACAAAACCTCTCATCACTAATGTCATGTGGAGGAACCTATTGGCTCAAGCTTTGTACCAAATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAACACATTTGTTCTTTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGCATTATTGGCATAACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTTAAGAAATTTGCTGATACAGAGAGGCTAAATTGGGGGCAATGGGCTATCTGCATTGGTCTAGCTGCAGTTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGATAAACCATTGCTCAGTTTTTTTAATATGAAAAAAATGAAGACATAG 1176 0.4184 MTNESSSFLLQGLVGIKDPCRPGVKNAVEACQNAGVNVKMITGDNVFTAKAIATECGILWPNQDTTGAVIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWAICIGLAAVSWPIGWVVKLIPVPDKPLLSFFNMKKMKT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02341 391 NCBIfam HAD-IC family P-type ATPase 91 199 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g02341 391 Gene3D - 20 163 IPR023214 -
Pumo2g02341 391 FunFam Calcium-transporting ATPase 135 377 - -
Pumo2g02341 391 Gene3D - 6 19 IPR023299 GO:0000166
Pumo2g02341 391 PRINTS P-type cation-transporting ATPase superfamily signature 12 23 - -
Pumo2g02341 391 PRINTS P-type cation-transporting ATPase superfamily signature 142 154 - -
Pumo2g02341 391 PRINTS P-type cation-transporting ATPase superfamily signature 34 44 - -
Pumo2g02341 391 PRINTS P-type cation-transporting ATPase superfamily signature 118 137 - -
Pumo2g02341 391 Pfam haloacid dehalogenase-like hydrolase 11 132 - -
Pumo2g02341 391 FunFam Calcium-transporting ATPase 11 163 - -
Pumo2g02341 391 NCBIfam calcium-translocating P-type ATPase, PMCA-type 4 375 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo2g02341 391 Gene3D - 164 372 - -
Pumo2g02341 391 SUPERFAMILY Calcium ATPase, transmembrane domain M 30 375 IPR023298 -
Pumo2g02341 391 Pfam Cation transporting ATPase, C-terminus 203 373 IPR006068 -
Pumo2g02341 391 SUPERFAMILY HAD-like 9 223 IPR036412 -
Pumo2g02341 391 PANTHER CATION TRANSPORTING ATPASE 6 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02341 Pumo-Chr2 50272912 50277100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02341 4 384 Primary Pumps ATPases AT3G63380 78.534 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02341 K01537 - gmx:100793918 716.072