Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02340 ATGACAAATGAGTCATCTTCGTTTTTATTACAAGGACTAGTGGGGATTAAGGATCCATGTCGTCCAGGCGTGAAGAATGCTGTGGAAGCATGCCAAAATGCTGGTGTCAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCAATAGCAACCGAATGTGGTATACTCCGGCCAAATCAGGACACAACTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACCTGAAGAGAGGTTGGAGAAGGTGGACAAAATCTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTAAAACAAAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTAGTCACTGTCTTAAAGTGGGGAAGGTGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTGGCAGCACTTGCAATCAACTTTGTGGCAGCTGTGTCAGCTGGAGAAGTGCCACTAACAGCAGTGCAATTATTGTGGGTGAACTTGATCATGGACACATTAGGTGCCTTGGCTCTTGCAACAGAAAAGCCTACCATGGAGTTGATGGACAACCCACCAGACCATGGTGGTGTAGCCTTGTGCATTTATTTTGCTACTAGTTGA 762 0.437 MTNESSSFLLQGLVGIKDPCRPGVKNAVEACQNAGVNVKMITGDNVFTAKAIATECGILRPNQDTTGAVIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLKWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDNPPDHGGVALCIYFATS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02340 253 Gene3D - 164 241 - -
Pumo2g02340 253 Gene3D - 6 19 IPR023299 GO:0000166
Pumo2g02340 253 FunFam Calcium-transporting ATPase 12 163 - -
Pumo2g02340 253 PANTHER CATION TRANSPORTING ATPASE 6 240 - -
Pumo2g02340 253 PRINTS P-type cation-transporting ATPase superfamily signature 34 44 - -
Pumo2g02340 253 PRINTS P-type cation-transporting ATPase superfamily signature 12 23 - -
Pumo2g02340 253 PRINTS P-type cation-transporting ATPase superfamily signature 142 154 - -
Pumo2g02340 253 PRINTS P-type cation-transporting ATPase superfamily signature 118 137 - -
Pumo2g02340 253 NCBIfam HAD-IC family P-type ATPase 91 199 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g02340 253 Pfam Cation transporting ATPase, C-terminus 203 240 IPR006068 -
Pumo2g02340 253 Pfam haloacid dehalogenase-like hydrolase 11 132 - -
Pumo2g02340 253 Gene3D - 20 163 IPR023214 -
Pumo2g02340 253 SUPERFAMILY HAD-like 9 223 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02340 Pumo-Chr2 50186348 50192014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02340 10 239 Primary Pumps ATPases AT3G22910 84.848 1.74e-134 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02340 K01537 - gmx:100793918 435.261