Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02339 ATGCCAGGACTAGTGGGGATTAAGGATCCATGTCGTCCAGGCGTGAAGAATGCTGTGGAAGCATGCCAAAATGCTGGTGTGAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCTATAGCAACCGAATGTGGTATACTCCGGCCAAATCAGGACACAACTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACCTGAAGAGAGGTTGGAGAAGGTGGACAAAATCTGTGTGATGGCAAGATCTTCTCCATTTGACAAACTTCTAATGGTTAAATGCCTAAAACAAAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGATGTGGCCAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTAGTCACTGTCTTAAGGTGGGGAAGGTGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTGGCAGCACTTGCAATCAACTTTGTGGCAGCTGTGTCAGCTGGAGAAGTGCCACTAACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAAAAGCCTACAATGGAGTTGATGGACAAACCACCAGTAGGTAGAACAAAACCTCTGATTACTAATGTCATGTGGAGGAACCTATTGGCTCAAGCTTTGTACCAAATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAACACATTTGTTCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGCATTATTGGCATAACAATAATCCTTCAGGTGGTGATGGTTGAGTTTCTTAAGAAATTTGCTGACACAGAAAGGCTAAATTGGGGGCAATGGGGTATTTGCATCGGTCTAGCTGCAGTTTCCTGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGATAAACCATTGCTCAATTTTTTGAGAATGAAGAAATGA 1140 0.4246 MPGLVGIKDPCRPGVKNAVEACQNAGVNVKMITGDNVFTAKAIATECGILRPNQDTTGAVIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVKCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTDVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGICIGLAAVSWPIGWVVKLIPVPDKPLLNFLRMKK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02339 379 Gene3D - 155 363 - -
Pumo2g02339 379 NCBIfam calcium-translocating P-type ATPase, PMCA-type 3 366 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo2g02339 379 NCBIfam HAD-IC family P-type ATPase 82 190 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g02339 379 PANTHER CATION TRANSPORTING ATPASE 3 366 - -
Pumo2g02339 379 Pfam haloacid dehalogenase-like hydrolase 5 123 - -
Pumo2g02339 379 PRINTS P-type cation-transporting ATPase superfamily signature 133 145 - -
Pumo2g02339 379 PRINTS P-type cation-transporting ATPase superfamily signature 109 128 - -
Pumo2g02339 379 PRINTS P-type cation-transporting ATPase superfamily signature 25 35 - -
Pumo2g02339 379 PRINTS P-type cation-transporting ATPase superfamily signature 3 14 - -
Pumo2g02339 379 SUPERFAMILY HAD-like 3 214 IPR036412 -
Pumo2g02339 379 Gene3D - 11 154 IPR023214 -
Pumo2g02339 379 FunFam Calcium-transporting ATPase 4 154 - -
Pumo2g02339 379 FunFam Calcium-transporting ATPase 126 368 - -
Pumo2g02339 379 Pfam Cation transporting ATPase, C-terminus 194 364 IPR006068 -
Pumo2g02339 379 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 366 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02339 Pumo-Chr2 50162420 50167349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02339 3 379 Primary Pumps ATPases AT3G22910 79.365 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02339 K01537 - gmx:100793918 717.227