Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02338 ATGAATATTAGCATCGGGAAAAGTTGTATGGATCCATGCCGTCCAGGGGTGAAGAATGCTGTGGAAGCGTGCCAAAAGGCTGGTGTGAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCCATAGCAACCGAATGCGGCATACTTGGGCCTAATCAGGACACAGATGGAGCAGTGGTTGAAGGAGAGGAATTTCACAACTACACACCAGAAGAGAGGTGGGGAAGATGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTTGCGGCACTTACCATCAACTTTGTAGCAGCAGTGCTAGCAGGAGAATTGCCACACTCAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTGGCTTTGGCAACAGAAAAGCCTACAATGGAGTTGATGGACAAACCACCAGTTGGTAGAACAAAACCTCTCATCACCAATGTCATGTGGAGGAATATCTTAGCACAAGCTTTGGCCTTCATGGGATATTTCCACTTCCACGAAGCCCACCACCAGTTGACTCTTCTCATCTCATTCTCCCAGTTGAGCGGTTGCTGA 594 0.4596 MNISIGKSCMDPCRPGVKNAVEACQKAGVNVKMITGDNVFTAKAIATECGILGPNQDTDGAVVEGEEFHNYTPEERWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVLAGELPHSAVQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTKPLITNVMWRNILAQALAFMGYFHFHEAHHQLTLLISFSQLSGC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02338 197 PANTHER CATION TRANSPORTING ATPASE 76 173 - -
Pumo2g02338 197 FunFam copper-transporting ATPase 1 isoform X2 8 52 - -
Pumo2g02338 197 SUPERFAMILY Calcium ATPase, transmembrane domain M 78 175 IPR023298 -
Pumo2g02338 197 Pfam Cation transporting ATPase, C-terminus 113 172 IPR006068 -
Pumo2g02338 197 SUPERFAMILY HAD-like 10 82 IPR036412 -
Pumo2g02338 197 Gene3D - 13 75 IPR023214 -
Pumo2g02338 197 Gene3D - 77 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02338 Pumo-Chr2 50146711 50150996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02338 11 76 Primary Pumps ATPases AT3G22910 71.642 7.83e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02338 K01537 - oeu:111391497 184.882