Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo2g02336 | ATGATCACAGGTGACAATGTTTTCACTGCAAAGGCTATAGCAACCGAATGTGGCATACTCCTGCCTAATCAGGACATAGTTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACCAGAAGAGAGGTTGGAGAAGGTGGACAAAATCTGCGTGATGGCAAGATCTTCTCCCTTTGACAAACTTCTAATGGTTCAATGCCTAAAGCAGAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAGGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCAAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGGTGGGGAAGGTGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTGGCAGCACTTGCAATCAACTTTGTGGCAGCAGTGTCAGCTGGGGAAGTGCCACTAACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCTCTTGCAACAGAGAAGCCTACCATGGAGTTGATGGACAAACCACCATTTTGCTGA | 609 | 0.445 | MITGDNVFTAKAIATECGILLPNQDIVGAVIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDKPPFC | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo2g02336 | 202 | Gene3D | - | 125 | 200 | - | - | |
| Pumo2g02336 | 202 | Gene3D | - | 1 | 124 | IPR023214 | - | |
| Pumo2g02336 | 202 | Pfam | haloacid dehalogenase-like hydrolase | 1 | 93 | - | - | |
| Pumo2g02336 | 202 | PRINTS | P-type cation-transporting ATPase superfamily signature | 103 | 115 | - | - | |
| Pumo2g02336 | 202 | PRINTS | P-type cation-transporting ATPase superfamily signature | 79 | 98 | - | - | |
| Pumo2g02336 | 202 | PANTHER | CATION TRANSPORTING ATPASE | 1 | 200 | - | - | |
| Pumo2g02336 | 202 | Pfam | Cation transporting ATPase, C-terminus | 164 | 200 | IPR006068 | - | |
| Pumo2g02336 | 202 | SUPERFAMILY | HAD-like | 1 | 184 | IPR036412 | - | |
| Pumo2g02336 | 202 | NCBIfam | HAD-IC family P-type ATPase | 52 | 160 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo2g02336 | Pumo-Chr2 | 50097344 | 50098028 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pumo2g02336 | 1 | 200 | Primary Pumps ATPases | AT3G22910 | 86.070 | 4.61e-116 | 351 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo2g02336 | K01537 | - | gmx:100793918 | 377.096 |