Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02335 ATGCATGTTGATTGCTTGTGCTACCTTTACCTTTGTTCCTCTGCCAATCTGTTCGCCGCACTAGTAGACTTGGTGATTGTTGATGGGCTTGTGGGGATAAAGGATCCATGCCGCACAGGGGTGAAGAATGCTGTGGAAGCATGCCAAAAGGCTGGTGTGAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAGGCCATAGCAACCGAATGCGGCATACTTGGGCCTAATCAGGACACAGATGGAGCAGTGCTTGAAGGAGAGGAATTTCGCAACTACACACCAGAAGAGAGGTTGGAGAAGGTGGACAAAATCTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTAAAGCAGAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATTCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGATATTGTTATATTGGATGACAATTTTGCAACTATAGTCACTGTCTTAAGGTGGGGAAGATGTGTTTACAACAACATCCAGAAGTTCATTCAGTTTCAATTGACAGTGAATGTTGCGGCACTTACCATCAACTTTGTAGCAGCAGTGCTAGCAGGAAAATTGCCACACTCAGCAATGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTGGCTTTGGCAACAGAAAAGCCTACAATGGAGTTGATGGACAAACCACCAGTTGGTAGAACAAAACCTCTCATCACCAATGTCATGTGGAGGAATATCTTAGCACAAGCTTTGTACCAGATAGTAGTTTCGCTGACTCTTCAATTTAGAGGTGAGTCTATCTTTGGTGTAACGTCAGAGGTAAATGACACATTGATTTTCAACACATTTGTTCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGAGAGATGGAGAAGAAGAATGTTTTCAAAGGCATACACACAAGCAAGTTATTTTTCGGCATTATTGGCTTCACAATAATCCTTCAGGTTGTGATGATTGAGTTTCTCAAGAAATTTGCTGATACAGAAAGGCTAAATTGGGGGCAATGGGCTATTTGCGTTGCTCTAGCTGCAATTTCCTGGCCAGTTGGTTGGGTTGTGAAGTTGATACCTGTTGCAGATAAACCATTACTCAATTTCTTGACCATGAAAAAAATGATGACATGGCCATGTAGGGTAGTGTCTTTTGTGATCCATGCAATTTTCCAATAG 1272 0.4237 MHVDCLCYLYLCSSANLFAALVDLVIVDGLVGIKDPCRTGVKNAVEACQKAGVNVKMITGDNVFTAKAIATECGILGPNQDTDGAVLEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFATIVTVLRWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVLAGKLPHSAMQLLWVNLIMDTLGALALATEKPTMELMDKPPVGRTKPLITNVMWRNILAQALYQIVVSLTLQFRGESIFGVTSEVNDTLIFNTFVLCQVFNEFNAREMEKKNVFKGIHTSKLFFGIIGFTIILQVVMIEFLKKFADTERLNWGQWAICVALAAISWPVGWVVKLIPVADKPLLNFLTMKKMMTWPCRVVSFVIHAIFQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02335 423 Gene3D - 181 389 - -
Pumo2g02335 423 PANTHER CATION TRANSPORTING ATPASE 26 392 - -
Pumo2g02335 423 Pfam Cation transporting ATPase, C-terminus 221 390 IPR006068 -
Pumo2g02335 423 SUPERFAMILY Calcium ATPase, transmembrane domain M 185 392 IPR023298 -
Pumo2g02335 423 PRINTS P-type cation-transporting ATPase superfamily signature 29 40 - -
Pumo2g02335 423 PRINTS P-type cation-transporting ATPase superfamily signature 135 154 - -
Pumo2g02335 423 PRINTS P-type cation-transporting ATPase superfamily signature 51 61 - -
Pumo2g02335 423 PRINTS P-type cation-transporting ATPase superfamily signature 159 171 - -
Pumo2g02335 423 Pfam haloacid dehalogenase-like hydrolase 24 149 - -
Pumo2g02335 423 FunFam Calcium-transporting ATPase 152 394 - -
Pumo2g02335 423 Gene3D - 23 36 IPR023299 GO:0000166
Pumo2g02335 423 Gene3D - 37 180 IPR023214 -
Pumo2g02335 423 FunFam Calcium-transporting ATPase 25 180 - -
Pumo2g02335 423 NCBIfam HAD-IC family P-type ATPase 108 218 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo2g02335 423 SUPERFAMILY HAD-like 26 240 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02335 Pumo-Chr2 50082072 50086797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02335 29 405 Primary Pumps ATPases AT3G22910 76.455 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02335 K01537 - gmx:100793918 680.633