Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02329 ATGGGGAAGCCAAGAGGAGAAGCTGTTCTTTGTTTTGTGGTTTTTTTCTGGTTTTGGAGCTCTTCCAATGCATTGCTTTCTCCAAAGGGTGTAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTAGTGGATCCTCATGGTATTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGCAGCTGGAACATGGTCACATGTTCCCCTGAGAACCTTGTTATTAGCCTGGGCATTCCCAGTCAAAATTTGTCTGGCACTCTATCTCCAAGCATAGGAAACCTGACAAATCTTCAGACTGTTATGCTACAGAATAACAACATAACTGGACCAATCCCTTCAGAGCTAGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTGATAACTTCTTCAATGGGGAAATTCCCCACTCTCTGGGTCACCTGAGAAGCCTCCAATACTTGAGGCTTAATAATAACAGTTTTGATGGAGAATGCCCAGAGTCACTAGCTAACATGGCACAACTTGCTTTTCTTGACTTGTCCTATAACAATCTGAGTGGCCCTATACCTAAAATTTTGGCCAAATCATTCAGTATTGAAGGAAACCCCCTCGTCTGTGCTACAGAAAAAGAAAAAAATTGTCATGGGATGACACTTATGCCTATGTCAATGAACTTGAACAATACTGAGGATGCTTTACCATCTGGCAGAAAAAGGGCTCACAAAATGGCCATAGCCTTTGGTTTAAGTTTGGGATGCCTCAGCTTGATTGTTCTTGGTGTTGGACTTGTTCTATGGAGGAGGCACAAGCATAAACAACAGGCATTCTTTGATGTCAAAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTTCATTTAAGAGAACTCCAAATTGCTACCGACAACTTCAGCAACAAAAACATTCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAATTCTCCCAGATGGAACTTTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGTGATATACAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCGGTGCACCGAAACCTGCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCTTACATGTCCAATGGCAGTGTTGCTTCTAGGCTCAAGGGTAAGCCAGTGTTGGACTGGGGCACAAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGACTACTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGAGATGTAAAGGCTGCAAATATATTGCTTGATGACTATTGTGAGGCAGTGGTAGGAGATTTTGGGTTGGCAAAGCTTTTAGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACAGTGGGGCATATTGCACCAGAGTATCTTTCCACAGGGCAATCTTCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGCCAGAGGGCTCTGGAATTTGGAAAAGCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATTCATCAAGAGAAGAAGCTTGAGTTGCTTGTTGACAAGGATCTCAAGACCAACTATGACCGGATTGAGCTTGAGGAAATTGTTCAAGTGGCACTCTTGTGCACCCAATATCTTCCGGGCCATAGGCCCAAAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCCTCACAAAGTGCTGACACTACTAAGTGCAAACCACAAGAACTCTCTTCATCAGATAGGTATTCTGACCTCACTGATGATTCTTCATTGTTAGTCCAAGCCATGGAACTCTCAGGCCCTAGGTGA 1875 0.4341 MGKPRGEAVLCFVVFFWFWSSSNALLSPKGVNFEVQALMGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPENLVISLGIPSQNLSGTLSPSIGNLTNLQTVMLQNNNITGPIPSELGKLSKLQTLDLSDNFFNGEIPHSLGHLRSLQYLRLNNNSFDGECPESLANMAQLAFLDLSYNNLSGPIPKILAKSFSIEGNPLVCATEKEKNCHGMTLMPMSMNLNNTEDALPSGRKRAHKMAIAFGLSLGCLSLIVLGVGLVLWRRHKHKQQAFFDVKDRHHEEVYLGNLKRFHLRELQIATDNFSNKNILGKGGFGNVYKGILPDGTFVAVKRLKDGNAIGGDIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVRKIHQEKKLELLVDKDLKTNYDRIELEEIVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQSADTTKCKPQELSSSDRYSDLTDDSSLLVQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02329 624 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Pumo2g02329 624 SUPERFAMILY L domain-like 34 204 - -
Pumo2g02329 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Pumo2g02329 624 Pfam Protein kinase domain 305 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02329 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 584 - -
Pumo2g02329 624 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Pumo2g02329 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02329 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Pumo2g02329 624 FunFam Somatic embryogenesis receptor-like kinase 1 381 593 - -
Pumo2g02329 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Pumo2g02329 624 ProSiteProfiles Protein kinase domain profile. 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02329 624 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Pumo2g02329 624 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Pumo2g02329 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Pumo2g02329 624 MobiDBLite consensus disorder prediction 584 610 - -
Pumo2g02329 624 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Pumo2g02329 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02329 Pumo-Chr2 49975138 49979685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02329 7 624 Receptor kinase-like Gene Family AT5G16000 77.796 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pumo2g02329 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02329 - - gmx:100806650 1176.39