Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02328 ATGGCTCACAATGTTGATCAATGTCAGAAGGTAAAAGTCATAGAGCAATGCCAAGTTTCTCCCCCACGAGGGTCTGTTCCACCAACCTCTCTTCCTCTAGCTTTCCTTGACATTCCTTGGGTTTACTGTGTCCCAGTGCAAAGAATTTACTTCTATGAGTTTCCTCACTCTAGTAACCACTTCTTGCAAACAGTGCTTCCCATTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTCTTCCCCTTCTCTGGAAATCTCGTGATCCCTCCTAAGCCACACTTCCCTCACATTCACTACACCCATGAAAACTCCATCTCCTTCACCATTGCAGAATCCACTGCAGAATTCCCACGCCTCGTAGGTGACACCGCAAGAGATGTTAGAGACTCTCACCCTTTTGTTCCTGTGTTACCTACCCCAATTACCAAAGAAGATGGCACATGGTTGTTCCCTCTTATGGCTATTCAACTCACCATTTTCCCCAACTCTGGGTTCAGCATCTGCATCACCTTCAACCATGTCGCTGCTGATGGAAGAGCCTTCCATCGTTTCATGAAGTTTTGGTCCTATGTTTGTAAGACAAAATGTGACTTAGCATCATCCTCTCAAGCTTTATTACCATTGCTCAATAGGGACATCATCGAAGACCCCAAAGGGCTTAAACTCATTTTGTGGAAGGAGTTATGGAATTCTCCTATAGAAAGCATAATAAAAGAACCCTCCAATGTTGTTGATAACAATGACAAAGTCCGTCACGGTTTTGTGTTGAGCCGTGACCATGTTGAGAAACTAAAGAAATGGGTGTCTATTCAGTGCAAGAGTACTTATGGGTTAGACTTAGAGTTATTGCACATATCAACCTTTGCAGTGACATGTTCTTTGATGTGGGTTTGTAGGGTGCAATCAGAAGAGACCAATGCTAGTAGCACTATTCCTAATAATGATGAAATCTACAAATTGGGGTTTCTTGCAGATTGTCATAACCGTCTTGAATTTTCAGTTCCTCCAACGTACTTTGGAAATTGCCTTGTTCTTCGCATTGTATCACTCAAGAGGGGCACGCTAATGGGAGAAAATGGGATCTTAGATGCTATGAAAGGGGTTGAAAGTATTATGTCTGACTTTAAAGAACTAAGCCAACAAGGGAAAAGTGTAGTAACAATTGCAGGGTCCCCTAAGATAGGTGCATATGAGACTGATTTTGGATGGGGAAAGCCAAAGAAGAGTGAAATACTTCACATAGAAAATTCAGGATCTATTTCGCTTTCTGATTGTAGGGATGAAGAAGGTGGAGTGGAAGTTGGACTAGTACTTGGAAGGGCTCAAATGAGCAAATTTTCTTCTATCTTGGGAGAATATCTTAGAAATATTGCAGGACGTAGTGGCTAA 1392 0.4231 MAHNVDQCQKVKVIEQCQVSPPRGSVPPTSLPLAFLDIPWVYCVPVQRIYFYEFPHSSNHFLQTVLPILKHSLSLTLQHFFPFSGNLVIPPKPHFPHIHYTHENSISFTIAESTAEFPRLVGDTARDVRDSHPFVPVLPTPITKEDGTWLFPLMAIQLTIFPNSGFSICITFNHVAADGRAFHRFMKFWSYVCKTKCDLASSSQALLPLLNRDIIEDPKGLKLILWKELWNSPIESIIKEPSNVVDNNDKVRHGFVLSRDHVEKLKKWVSIQCKSTYGLDLELLHISTFAVTCSLMWVCRVQSEETNASSTIPNNDEIYKLGFLADCHNRLEFSVPPTYFGNCLVLRIVSLKRGTLMGENGILDAMKGVESIMSDFKELSQQGKSVVTIAGSPKIGAYETDFGWGKPKKSEILHIENSGSISLSDCRDEEGGVEVGLVLGRAQMSKFSSILGEYLRNIAGRSG 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02328 463 PANTHER - 11 455 - -
Pumo2g02328 463 Gene3D - 247 457 IPR023213 -
Pumo2g02328 463 Gene3D - 10 239 IPR023213 -
Pumo2g02328 463 Pfam Transferase family 10 349 - -
Pumo2g02328 463 Pfam Transferase family 371 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02328 Pumo-Chr2 49903872 49911774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02328 49 453 Monolignol Biosynthesis Gene Families AT5G48930 23.733 9.48e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02328 - - gmx:100817697 686.026