Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02327 ATGGCTCACCCTGTTGATCATTGTCAGAAGATGAAAATCATAGAGCAATGTCAAGTTTCTCCTCCACCAGGATCCGTTCCACCAACCTCTCTTCCTCTAGCTTTCCTTGACCTTCCTTGGCTTTACTGTGACACAGTGCAAAGCATTTTCTTCTATGAGTTTCCTCACTCTAGTAACCATTTCTTGCAAACAGTGCTTCCAAATCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTCTTCCCCTTCTCTGGAAATCTCGTGATCCCTCCTAAGCCCCACTTCCCTCACATCCTCTACACCCGTGAAAACTCCATCTCCTTCACCATTGCAGAATCCACTGCTGAGTTTCCACATCTCATAGCTGACACTGCAAGAGATGTCAGAGACTCTCACCCTTTTGTTCCTGTGTTACCTACCCCAAGTACCAAAGAAGATGATGGCACATGGCAGCTCCCTCTTATGGCTATTCAACTCACCATTTTCCCCAACTATGGCTTCAGCATTTGCATGAGCTTTAGACATGTTGTTGCTGATGGTAGAGCATTCCTTCATTTCATGAAGTTTTGGTCCAACGTTTGTAGGACAAAATGTGACGTGGCATCATCCTCTCAAGCTCTACCGTTGCTCGATAGGGACATCATCAAAGACCCCAAAGGGCTTAAGCTTGTTTTCTCGGAGGAATTATGGAATTCTCCTATGGAAACCATAATTAAAGAACGCCCCAAAGTTGTTGACAAAGTCCGTCATGTCTTTGTGTTGAGCCGTGACCATGTTGAGAAGCTAAAGAAATGGGTGTCTGTTGAGTGCAAGAGTTATTATGGGTTAGACTTAGACTCATTGCACATATCAACCTTTGTGGTGACAAGTTCTTTGATGTGGGTTTGTAAGGTCCAAACAGAAGAAGAGGACAATGCTAGCACTATTCCTAATAATGATGAAATCTACGAATTGGTTTTTCTGGGTGATTGTCGTAACCGTCAAGAATTTTCGATTCCTTCAATGTACTTTGGAAACTGCGTTGTTCTACGCGCAGTGTCACTCAAGAGGGGCAAGCTAATGGGAGATAAAGGGATTGTTGAGGCAGCGATTGATATTGGAAGGAAAGTTAAAGATTTTCAATTTGATGCTATGAAAGACGTTGAGAGTTTTATGTCTATCTCTAAAGGAGTACGAGAATGGGTGCATTCGGTTACAATTGCAGGGTCGCCAAAGCTAGGTGCATATGAGACTGATTTTGGATGGGGAAAGCCTAAGAAGAGTGAAATACTTCACATAGAATATTCAGGAACTATCTCGCTTTCTGATTGTAGGGATGAAGAAGGTGGAGTGGAAGTTGGGTTAGTACTTGGAAGGGCACAAATGAGCAAATTTTCTACTATCTTGGAAGAATATCTAAGAAATATTAACAGTCGTGACTAA 1422 0.4269 MAHPVDHCQKMKIIEQCQVSPPPGSVPPTSLPLAFLDLPWLYCDTVQSIFFYEFPHSSNHFLQTVLPNLKHSLSLTLQHFFPFSGNLVIPPKPHFPHILYTRENSISFTIAESTAEFPHLIADTARDVRDSHPFVPVLPTPSTKEDDGTWQLPLMAIQLTIFPNYGFSICMSFRHVVADGRAFLHFMKFWSNVCRTKCDVASSSQALPLLDRDIIKDPKGLKLVFSEELWNSPMETIIKERPKVVDKVRHVFVLSRDHVEKLKKWVSVECKSYYGLDLDSLHISTFVVTSSLMWVCKVQTEEEDNASTIPNNDEIYELVFLGDCRNRQEFSIPSMYFGNCVVLRAVSLKRGKLMGDKGIVEAAIDIGRKVKDFQFDAMKDVESFMSISKGVREWVHSVTIAGSPKLGAYETDFGWGKPKKSEILHIEYSGTISLSDCRDEEGGVEVGLVLGRAQMSKFSTILEEYLRNINSRD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02327 473 Gene3D - 244 468 IPR023213 -
Pumo2g02327 473 Gene3D - 10 240 IPR023213 -
Pumo2g02327 473 PANTHER - 11 467 - -
Pumo2g02327 473 Pfam Transferase family 25 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02327 Pumo-Chr2 49884249 49885739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02327 48 464 Monolignol Biosynthesis Gene Families AT5G48930 24.074 3.57e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02327 - - gmx:100817697 788.875