Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02300 ATGCATGCAGAAGGTTCTAATCTCGGGAATACCTGCAAACAAATACAAAGGAATTCTTCATCTTTTGTCCCAAACCTTCCTCTGCAGGGAGGTTTTGATTTAAGGCATCAAACTTATATAAGGAATCAAGCAAGGCCCTTCTCAGACTGGCGTAAGGATCCTGCAATTAGCCACTACCGTAATTCGATTAGAAATGACACTTCTGCAATTTTGAGTTCCCGATACCGTTATGAGCAAGAACAGGTAGCTGTTATAGCAAATTTTCTGGAAAACCGGCTATTTATGGAAGCTGCTTCACAGGAGGAGTATATAAACAGGAAGACATTGATGCAGCGATTGGATACACAACTGAAGAAGTTGCATGCGCCAAAACAAATAGATAGATCTATTACTTGCACATCTAAGATGGTGCCCTCTTCTGGGTTATTGCATGCTAGGTCTAATGGAAGTGTACTGGAACCAGCTTTTCAGAAAGTGGCTGGTCCTATCACTAATGCAACAGATTATTGTGCAGTGGATGAAGATAATAAATATGGCTTCGCAAAAGGAGGGCTATCTTATTCTTCTGTTGTTCACAAGCCGGTTTTTTCACCTGATAACAGTTCATCGATCACTACATGCAATGTGGTTCCTAACTTATCTGTTTCTGGTGGGAGAAGCAATCTGGAAGCTAGCTCCAAGTCAGTCAGTTCCTATTTTCCTCAGCGACAAGCAAATGATTGGGAGATGATTCTGATGAAGTACGGAGGTTGTTCTAGGACTATCCAGAAAAGTGATTCAATGGCTTTCATCACTTCAATGGGAAAATCCGTCCAATCTGAATATTCAAATTTGCTGCCCCCCCAACATGTCTCAAGGGAATTTTCAAAAGTTTCCCATCTTTCTCCTGGCTCGAGCAGCCTTGGAGATATAAGGCAGCATCAACAACAGAATCTCAAACATTCTATGCAGCCATATGTGCTTCATGGTAAAACTTATATGGGCCAGCCTAATTCATGCTGTGTCAATCAAGGTGAACATTGCCGTCAAATGTTGGGGCAGAAAACATTGAAACAGCCACAGCTTGTCACAAAAAGTCTCAATGGGGATCAACAGTTCACTTCAGGGAGCTCAGCAGATCTTCTTGGTATAGATGGATCTGCCAATATGAATTCATGCAGTAGTTCCAAAGTTTCAGTTGAACAGAGGATCCTGCTTGAATATTTTTATTACAAGAATTTAAACATTATTTCAAGGGATAATGTTATGAAATATCTGCATTCAACAGCTTGTCGTAAAGGGATGTGTACTTGTGAATGGTATAGGAAGCTGTTATTGCATTTTGATGACTGTAAAGATGATAATTGTCATACATGTTACTCCTGGAAGTTGCGTGGCACTGATATTCTTGAGCGTCATTTGGAATTTCCAAATAGCGTAATTATGGGTTCTGTTGGAAGAAAAACAGATGCTCCTTCTGGTCATTCTGAAGACGTGTTACCACCTGCCAAAAGAAGAAAAATGGAGTCTGCTTTTGGTGTCTCTTTAATTAATAAAGCAAGTTCGGATCGGTTGACTCACAGAATGGTTCAACCTCGTTCTTCTGAAGCACTTTCAGAGTCTGCTTTTGGTCCAAAAGCTGATCAAGAGAAGGAAAGGAAGTCCCCAAATCCAACAGTTAATACTGCAGATATAGAGGGCATACAAGACAGAACCAGGTTCAACCAGGATGGGATAAATGCTGCAGAGAAAGTCATTGAGCCAAAAGCTGATCAAGAGAAGGAAAGGAAGTCCCCAAATCCAACAGTTAATACTGCAGATATGGAGGACATACAAAGCAGAACCGGGTTGAACCAGGATGGGATAAATGCTACAGAGAAAGTCATTGAGCCAAAAGCTGATCAAGTGAATGAAAGGAAGTCCTCAAATCCAACAGTTAATACTGCAGATATAGAGGACATACAAGGAAGAACCGGGTTCAACCAGGATGGGATAAATGCTACAAAGAAAATCATTGAGCCAAAAGCTGATCAAGAGAAGGAAGGGAAGTCCCCAAATCCAACAGTTAATACTGCAGATATAGAGGACATACAAGGCAAATTCGGGTTCAACCAGGATGGGATAAATGCTACAAAGAACATCATTGAGCCAAAAACTGATCAAGAGAAGGAAAAGAAGTCCCCAAATCCAATAGTTAATACTGTTTCCTTAACTGATTTTTTCACAAGTAATCAAATAAAGGAACACATTGCAAGTCTGAGAAAGCAATTTAATCAGAGTACAATGGTTGAAGAATCAGGAATTGATGTTTACAAATGCCAATTATGTGGAATGGGAACACTTTCTTTTGCCCCCGTGCCAATTTATTGCTTTTGTTGCGGCATCCGCATCAAGCGAAACGCATGCTATTACTATAGAAGAGAAGAAGATGATACACAACATTGCTTTTGCAGTGTTTGCTTTAGGAATTCTCGAGGTGGGAACATCACATTCAATGGAACATCTGTTTCCAAGACAGATCTTGTTAAAAAGACAAATAATAGAGAATTTGAAGAAGCGTGGGTTGAATGTAATAAATGCAAAAGTTGGCAGCATCAAATATGTGCTCTCTATAACGATAAAAGAGATTTGGACTACAGAGCTGAGTATACATGTCCTATATGCCGCTTAAAGGAAATTGGAAATGGAATGCATGTACCCTTACCGAAGACAGCTGCTATGTTTAGTGCTAAGGACATGCCAAGAACCATGCTTAGCGACCACATAGAGAAGAGACTTTTTAAGCGTCTCAGGCAAGAGAATGAATATTGGGCAAAAGTTCAAGGGAACAAGAATCTTGATGAGGTTTTAGAAGCGGAAAGTCTTTCTGTTAGAGTAGTGTTATCTGTTGACAAACAATTGGAAGTGAAGAAACAGTTTCTGGACATCTTTGTGGAGGAGAATTACCCAGCCGAATTTTCTTATACATCAAAAGTTATTCTTCTGTTTCAGAAGATTGAAGGAGTGGATGTATGCCTTTTCGCAATGTATGTTCAGGAGTTTGGCTCGGAATGTGGCTATCCAAATCAGCGTTGTGTGTACATTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTGAAAGAGAGACTAAGAGTGGAGAAGCTCTTCGTACCATTGTTTACCATGAGATATTGATTGGATATCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTATATATGGGCCTGTCCACCTTTAAAGGGGGAAGATTATATACTATATTGTCATCCTGACACTCAAAAAACTCCGAAGAAAGATAAACTACGGCACTGGTATCATTCAATGCTAAGAAAGGCTGCTGAAGAAAATATCGTTGTTGGTTTAACCAACATATATGATTATTTCTTTGTTACTACTGGAAATTGTGACTCCAAGGTAACAGCTGCTCGTTTGCCTTACTTTGATGGGGATTTCTGGTCTGGTGCTGCTATGGATAAAGCCAGGCACATTGAAAAAGAGACTGGAGGAGATTATGAAACGATCTTCGAGAAAGTAGTATCGAAAAGATGTTTAAAGACCATGGGATATGTAAATCCTTCTGAAGGAACTGCCAAAGACATTCTCGTGATGTATAAACTGGGACAAACCATATTACCTTACAAGGAAGATTTTATCGTAGTTCAATTTCAGTATGTTTGCATTCACTGCCATGAAGTGATAGCGTCTGGGAAGCGATGGTTTTGCACCCAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGCTGACACACACAATTCTACCAAAGGCGAGAGGCATAAGCTTTCTCAGGTCCTCATGGATAACGTCCTTGGTGATACTAAGGAGAACGATATCATCCTTGATAACGGGTTATTTGATACCAGGTACAGCTTTCTGAGCTTTTGCCAAAGGAACAGGTTTCAGTTTGACTCACTCCGCCGAGCCAAGTATTCCTCAATGATGATCCTCCATCTTGTGAAGAACCCAACTCTTCTGACTGTTGGAACAATATGCCGCGTTTGCTCTAAAAACGATGTATCCCAACGCTACTGGAAATGTGAGAATTGCCCCGAGTTCACTGTCTGCTCTGCATGCTACAACGAGAGAGGTGCTAAGTGCCATGCACACACGTTGAGTGAAGCTTATTCACCAGCACAATCTCCTTCAGGGAATCAAGAGTTAAAGCAGAACTCGGCATTGTTGCAGGAACTGCTGGATGTTATAAAGCATGCATCGCTATGTCACTCAACTAAAACTCAACCATGCACTTACCCACATTGCCGTCAAATTAAAAAGCTGTTCTCTCATGCCAGTAGGTGCACTATTCGAGTTTCTGGGGGGTGCCAATTTTGTAAGAAGGTTTGGCAGGGACTGGCTTTACACTCGAGGAATTGTAGAGACTCAGCATGTCGCATCCCCCGTTGCATGGATCTGAAGAAGCAAGCAGAATGGATAGCTACGCAATCTGAATCGCGGCGTAGGGCTGCAGTTTTGGAAGACAGCAAAGAACTCTCTGTTCAATGA 4512 0.4094 MHAEGSNLGNTCKQIQRNSSSFVPNLPLQGGFDLRHQTYIRNQARPFSDWRKDPAISHYRNSIRNDTSAILSSRYRYEQEQVAVIANFLENRLFMEAASQEEYINRKTLMQRLDTQLKKLHAPKQIDRSITCTSKMVPSSGLLHARSNGSVLEPAFQKVAGPITNATDYCAVDEDNKYGFAKGGLSYSSVVHKPVFSPDNSSSITTCNVVPNLSVSGGRSNLEASSKSVSSYFPQRQANDWEMILMKYGGCSRTIQKSDSMAFITSMGKSVQSEYSNLLPPQHVSREFSKVSHLSPGSSSLGDIRQHQQQNLKHSMQPYVLHGKTYMGQPNSCCVNQGEHCRQMLGQKTLKQPQLVTKSLNGDQQFTSGSSADLLGIDGSANMNSCSSSKVSVEQRILLEYFYYKNLNIISRDNVMKYLHSTACRKGMCTCEWYRKLLLHFDDCKDDNCHTCYSWKLRGTDILERHLEFPNSVIMGSVGRKTDAPSGHSEDVLPPAKRRKMESAFGVSLINKASSDRLTHRMVQPRSSEALSESAFGPKADQEKERKSPNPTVNTADIEGIQDRTRFNQDGINAAEKVIEPKADQEKERKSPNPTVNTADMEDIQSRTGLNQDGINATEKVIEPKADQVNERKSSNPTVNTADIEDIQGRTGFNQDGINATKKIIEPKADQEKEGKSPNPTVNTADIEDIQGKFGFNQDGINATKNIIEPKTDQEKEKKSPNPIVNTVSLTDFFTSNQIKEHIASLRKQFNQSTMVEESGIDVYKCQLCGMGTLSFAPVPIYCFCCGIRIKRNACYYYRREEDDTQHCFCSVCFRNSRGGNITFNGTSVSKTDLVKKTNNREFEEAWVECNKCKSWQHQICALYNDKRDLDYRAEYTCPICRLKEIGNGMHVPLPKTAAMFSAKDMPRTMLSDHIEKRLFKRLRQENEYWAKVQGNKNLDEVLEAESLSVRVVLSVDKQLEVKKQFLDIFVEENYPAEFSYTSKVILLFQKIEGVDVCLFAMYVQEFGSECGYPNQRCVYISYLDSVKYFRPERETKSGEALRTIVYHEILIGYLDFCKKRGFTTCYIWACPPLKGEDYILYCHPDTQKTPKKDKLRHWYHSMLRKAAEENIVVGLTNIYDYFFVTTGNCDSKVTAARLPYFDGDFWSGAAMDKARHIEKETGGDYETIFEKVVSKRCLKTMGYVNPSEGTAKDILVMYKLGQTILPYKEDFIVVQFQYVCIHCHEVIASGKRWFCTQCKKFQECERCHTADTHNSTKGERHKLSQVLMDNVLGDTKENDIILDNGLFDTRYSFLSFCQRNRFQFDSLRRAKYSSMMILHLVKNPTLLTVGTICRVCSKNDVSQRYWKCENCPEFTVCSACYNERGAKCHAHTLSEAYSPAQSPSGNQELKQNSALLQELLDVIKHASLCHSTKTQPCTYPHCRQIKKLFSHASRCTIRVSGGCQFCKKVWQGLALHSRNCRDSACRIPRCMDLKKQAEWIATQSESRRRAAVLEDSKELSVQ 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02300 1503 SMART KAT11_2 934 1228 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo2g02300 1503 MobiDBLite consensus disorder prediction 578 593 - -
Pumo2g02300 1503 Gene3D TAZ domain 1386 1502 IPR035898 -
Pumo2g02300 1503 ProSiteProfiles Zinc finger TAZ-type profile. 1383 1474 IPR000197 -
Pumo2g02300 1503 Pfam Histone acetylation protein 939 1148 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo2g02300 1503 ProSiteProfiles Zinc finger ZZ-type profile. 1216 1272 IPR000433 GO:0008270
Pumo2g02300 1503 SUPERFAMILY RING/U-box 1197 1256 - -
Pumo2g02300 1503 CDD PHD_HAC_like 809 881 - -
Pumo2g02300 1503 Gene3D - 1214 1269 IPR043145 -
Pumo2g02300 1503 MobiDBLite consensus disorder prediction 578 599 - -
Pumo2g02300 1503 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 900 1327 IPR031162 GO:0004402
Pumo2g02300 1503 ProSiteProfiles Zinc finger PHD-type profile. 807 884 IPR019787 -
Pumo2g02300 1503 SMART TAZ_2 1391 1472 IPR000197 -
Pumo2g02300 1503 MobiDBLite consensus disorder prediction 664 685 - -
Pumo2g02300 1503 SUPERFAMILY TAZ domain 1395 1476 IPR035898 -
Pumo2g02300 1503 Gene3D - 1326 1379 IPR043145 -
Pumo2g02300 1503 SUPERFAMILY FYVE/PHD zinc finger 843 884 IPR011011 -
Pumo2g02300 1503 Pfam TAZ zinc finger 1397 1471 IPR000197 -
Pumo2g02300 1503 PANTHER CBP/P300-RELATED 84 1496 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pumo2g02300 1503 MobiDBLite consensus disorder prediction 516 531 - -
Pumo2g02300 1503 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 842 885 IPR013083 -
Pumo2g02300 1503 MobiDBLite consensus disorder prediction 516 556 - -
Pumo2g02300 1503 SMART zz_5 1215 1256 IPR000433 GO:0008270
Pumo2g02300 1503 SMART zz_5 1328 1372 IPR000433 GO:0008270
Pumo2g02300 1503 SMART PHD_3 809 882 IPR001965 -
Pumo2g02300 1503 SUPERFAMILY RING/U-box 1311 1378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02300 Pumo-Chr2 49094053 49103068 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pumo2g02300 HAT_KAT11 2e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02300 K04498 - gmx:102664049 2366.27