Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02297 ATGGATCCCTCTCGCCGTGGCCCACGCGCAGTGATCGACCCCGTGCCGAAGTTCCGGCAAGTCGGGTTCTTTGCCCCGCCCGAGCGCTCCCAATCGGGTCCTCCCGACCCGACCCACTCCTCTCCCCAAATCTCCAACTCCCTCTCCCCCGTCATGATCCCGCCGCCGCGCCACCTCTCCGACAACCTCCTCCTCCTCCACACCCCCCGCCCCGCCGTCTCTCCCCTCCGCCACGACTCCCCCTCCTCCGCCTCCGCCAACGCCGGCGGGAGCGGCAACTCCTTCGACGCCGCGGACTTCCCGCTCTCGCCCGCGATGCCGTCGTCTTCGTACTCCAGCAGGATCGCCACCGCCGCCGGAGAGGGAGGGTTCTTCAAGGGGAACGGCGCTGGCGGAAAGGTCGCGGCGTCGTCGTTCCCGCGCGGAGGATTCGACTTGACGGCGATGAAGGCGGCGGCGAGCGTCGTCGTGCCGGCCAGCGAGTTGACCACGGTTTCGGTGGTGAATGATTCGCTCGGGATTCCCGAAAAAGAAAAAGGAAACAAAGGAGGAGGGTCAGCAGTGGAAGTGAAAGACCAACCTAATAGTTCAAAGCAGCAGAAACCGAAAACCTCAAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTGCGGCTTCAACGAATGCAAAACCAGCTAAAGCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCAGTTGCAGCCTCTGAAAAGAAGGGTGGTGAGATTCCACCAGAAAAGGATAGAAAGAAAGATGCTCCTCAACCACGCATGCAGTATGACGACAAGAGCCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTGCCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAGGTTTTTCCATCTTTCTCCAGTGCACCCTGCTGTTTATAAGGTGGGTTTGCAGTATCTAACTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAACGTTCCACATGAGAAGACTCTCGTGAGAGACTTGACAGCAAAAATTAATAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGGTTTCTCAAAAGTCAGATAGCCAAGCTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCAGTTAGATATTGAGCGTTTTATAAGTGAAAAGATTATACTTGCCAACAAGGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCCTCATCAGCTGTTGAAATGATACTATTACATGCACATGAGTTGGGAAGACAGTTTCGTGTTGTGGTAGTTGACTCTCGTCCAAAGCTTAGAGGGCAACTTTTACTTCGCAGGCTTGTGGAGAAAGGTCTTAGCTGTACATATACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCAGCAGTTTTGTCCAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGCTGTGAGGCCTATAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAACGAACTTGGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAAAGGATGTTGACTACTTGGATGGCTGGGACAATATTGAAAATCTGCAACTTTTAAATCTGGTTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGAACCCTAG 1929 0.494 MDPSRRGPRAVIDPVPKFRQVGFFAPPERSQSGPPDPTHSSPQISNSLSPVMIPPPRHLSDNLLLLHTPRPAVSPLRHDSPSSASANAGGSGNSFDAADFPLSPAMPSSSYSSRIATAAGEGGFFKGNGAGGKVAASSFPRGGFDLTAMKAAASVVVPASELTTVSVVNDSLGIPEKEKGNKGGGSAVEVKDQPNSSKQQKPKTSKAERRALQEAQRAAKAAAKAEGNKASGTAASTNAKPAKAVKPAQKVDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDISGGNARCIAMLQAFQEAIKDYNVPHEKTLVRDLTAKINSYVSFLIECRPLSISMGNAIRFLKSQIAKLPLTLSESEAKASLQLDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGRQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVISNVLGRKDVDYLDGWDNIENLQLLNLVYDATPSDYVSMIVTDYGMEP 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02297 642 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 641 - -
Pumo2g02297 642 MobiDBLite consensus disorder prediction 166 298 - -
Pumo2g02297 642 MobiDBLite consensus disorder prediction 1 113 - -
Pumo2g02297 642 Pfam Initiation factor 2 subunit family 351 640 IPR000649 GO:0044237
Pumo2g02297 642 MobiDBLite consensus disorder prediction 34 50 - -
Pumo2g02297 642 SUPERFAMILY NagB/RpiA/CoA transferase-like 334 640 IPR037171 -
Pumo2g02297 642 MobiDBLite consensus disorder prediction 263 298 - -
Pumo2g02297 642 Gene3D - 446 642 IPR042529 -
Pumo2g02297 642 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02297 Pumo-Chr2 49048852 49058341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02297 4 642 Eukaryotic Initiation Factors Gene Family AT5G38640 65.000 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02297 K03680 - gmx:100775998 1068.91