Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02287 ATGCATATTCTAGTATGGCTAATTGCTCCAATAGCTGGCGCTCGACAATATGGAGAACAAGGCAGTCACCATCTAAACCAGAAAATTTATGACAAACAGGCTTCTCTCCAGAAAGCAATTCATCGTGATGTCCTTCATCCAGGGACGACTAATGTTTCCAAGGCTGAACTGGCGGAGAAACTAGGAAGAATATATGATGTGAAAGACACTAACATTGTATTTGTCTTCAAGTTCCAAACTCATTTTGGTGGTGGCAAGTCCACTGGGTTTGGTTTGATCTATGATTCAGTTGAGAATGCCAAGAAGTATGAGCCTAAGTACAGGCTTATCAGGAATGGACTTGATACCAAAGTAGAGAAATTGGAAGACAAAATGGGGCCAATCTCCAACTCTGTCATGGAACCTGGATTATCTTCTGCTCAAAATCAAAATGTAAACGAGGTTGTTGCCAGTGGCGAGAAACCAAAGTGTTCCAATTCTTGTGGAGTTCAAATAAGGGGAAGTAGAATCTATGATTCTGAAAATGGAAAAACTTGCCACCAACTCGGCAGAATTCTGAAGGGAGATGTCAATGCAGTAGGTGGCAAGGGCGCGAGCGGTAAAGGGGTTGTTCAGTTGGACGGTGACCTCACCGGTGTGTCGCTGTTGTTGAAGATCTTAAAATCCCCCGGAAGTCTCCCATATTCCCATCGTTATCCCAATCATCCCCACCTCCATCGTTGTTGCGTCCAGTCAAGAGCAACTTCCCCTTGCATTCATCGATGGGCAGGGGCAGAGCTACGTTATTGA 789 0.4461 MHILVWLIAPIAGARQYGEQGSHHLNQKIYDKQASLQKAIHRDVLHPGTTNVSKAELAEKLGRIYDVKDTNIVFVFKFQTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKLEDKMGPISNSVMEPGLSSAQNQNVNEVVASGEKPKCSNSCGVQIRGSRIYDSENGKTCHQLGRILKGDVNAVGGKGASGKGVVQLDGDLTGVSLLLKILKSPGSLPYSHRYPNHPHLHRCCVQSRATSPCIHRWAGAELRY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02287 262 Pfam Ribosomal protein S24e 43 119 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pumo2g02287 262 PANTHER 40S RIBOSOMAL PROTEIN S24 29 125 IPR001976 GO:0003735|GO:0005840|GO:0006412
Pumo2g02287 262 ProSitePatterns Ribosomal protein S24e signature. 82 104 IPR018098 -
Pumo2g02287 262 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 38 122 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pumo2g02287 262 Gene3D - 27 130 - -
Pumo2g02287 262 Hamap 30S ribosomal protein S24e [rps24e]. 25 122 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02287 Pumo-Chr2 48763661 48770066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02287 43 120 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 79.487 2.28e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02287 K02974 - gmx:100499673 152.525