Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02265 ATGCGAATGAGTTGTAACGGATGTCGTGTTTTGCGCAAAGGGTGTAGCGAAGATTGTAGCATAAGACCGTGTTTGCAATGGATCAAGAACCCAGAGTCGCAAGCTAATGCCACTTTGTTTCTTGCTAAGTTCTATGGTCGTGCTGGACTCATGAACCTCATCAACGCTGGACCTGAAAACCTACGTCCAGCCATTTTTCGATCCTTGTTATACGAGGCATGTGGTCGAATTGTGAACCCAATTTACGGGTCAGTGGGTTTGTTATGGTCTGGGAGCTGGCAGCTTTGTCAAGCCGCCGTGGAAGCCGTTTTGAAAGGCGAGCCGATCACGCCGATAACATCCGAAGCCGCGGCTAACGGGCGGGCCCCACCACTCAAGGCTTACGACATACGCCACGTGTCAAAATATGAGAACTCGGCAAACGAAACTCGAAAGGTCAAGACCCGGTCCCGGTTCAAGCGAACCGGTGGGACACTCATTAAACCGAAGGCCAACAAGGGAATCGGGTTTGTTCCGGTTGAGCCGGAGACAGCGAACCGAACCGCAAGTCACGAGTCCGGGCTGAGCCACCTGTCGGAAGCGGCGGCGATGGTGGAGGGAGAAAGCAAAGAGAGCGAAAGCGTGGTGTCGGTTGAAACTTCGCACCGATTTCACGAAGAACCGGAGTCGGTTGTGAAGACGAGTGACCGAACCGGTGAGAGTGGTAATGAAATCGGTTTGGAATTGACGCTCGGGTTTGAACCGGTCTCACGTGTGCATCACGTGGTTCCAGTGAAGAAGAGAAGGATAATTGAGTGTGGTGACTCGGCTGAGAAAGACTCGTGTAAGATGGAGCTGGGGCTTGAGTATCCGGCTTGA 858 0.528 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATLFLAKFYGRAGLMNLINAGPENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPITPITSEAAANGRAPPLKAYDIRHVSKYENSANETRKVKTRSRFKRTGGTLIKPKANKGIGFVPVEPETANRTASHESGLSHLSEAAAMVEGESKESESVVSVETSHRFHEEPESVVKTSDRTGESGNEIGLELTLGFEPVSRVHHVVPVKKRRIIECGDSAEKDSCKMELGLEYPA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02265 285 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pumo2g02265 285 MobiDBLite consensus disorder prediction 212 227 - -
Pumo2g02265 285 PIRSF AS2 1 284 IPR017414 -
Pumo2g02265 285 MobiDBLite consensus disorder prediction 212 233 - -
Pumo2g02265 285 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 244 - -
Pumo2g02265 285 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02265 Pumo-Chr2 48106957 48109044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02265 1 281 AS2 family AT3G02550 60.490 1.43e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo2g02265 LOB 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02265 - - gmx:100814175 508.834