Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02264 ATGTGTCTACAAGGAGTTGTTATGAAGTTTCTTGAAAAGAGGTACATTGAGATTGGGAGGGTTGCTCTCATTAACTATGACATGGAATATGGTAGGCTTGTCGTCATTGTTGATATCATTGACCAGAACATAGTAACCTACCACCCAAGTTCTCACCTTTTATCAAATCACAACGTTCTACGAGTCACAATTTGCTCAATGAGTCTTGGATTCACTAAGCAAAAATAA 228 0.3772 MCLQGVVMKFLEKRYIEIGRVALINYDMEYGRLVVIVDIIDQNIVTYHPSSHLLSNHNVLRVTICSMSLGFTKQK 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02264 75 SUPERFAMILY Translation proteins SH3-like domain 14 46 IPR008991 -
Pumo2g02264 75 Gene3D - 8 75 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02264 Pumo-Chr2 48098815 48099639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02264 13 43 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 70.968 1.67e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02264 K02875 - atri:130825655 57.7658