Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02259 ATGGCTCCCAAACAACCTAGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAAGAAGGAGTTGCCTCCACGCCCCTCAGATCGTAAGGGGAAAACAAGCAAGCGAGTTCACTTTGTGAGGAACCTCATTCGAGAGGTTGCTGGCTTTGCACCTTATGAAAAACGTATAACTGAGTTGCTCAAGGTTGGAAAAGATAAGAGGGCACTCAAGGTTGCAAAGAGAAAGCTTGGAACCCACAAACGTGCAAAGAAGAAGAGAGAAGAGATGTCCAATGTTCTCCGGAAGATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 333 0.4685 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02259 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo2g02259 110 FunFam 60S ribosomal protein L36 1 106 - -
Pumo2g02259 110 MobiDBLite consensus disorder prediction 79 110 - -
Pumo2g02259 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo2g02259 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Pumo2g02259 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo2g02259 110 MobiDBLite consensus disorder prediction 1 38 - -
Pumo2g02259 110 MobiDBLite consensus disorder prediction 87 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02259 Pumo-Chr2 47941161 47942922 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02259 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 6.56e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02259 K02920 - gmx:100526979 218.394