Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02251 ATGTACACTTCAAGGAAGAAAATTCACAAGGATAAGGATGCTGAGCCCACTGAATTTGAGGAGGCAGTTGCACAGTACTTGTTTAACTTGGAGAACACCTATCAGCATTCCGCAAGACTCATATTCAGAGAGTTGGAGAAGAAGTTTATTGGGAAGGATGTTGTCTTGATTGCCACAAGGAGGATCTTGCGGCCACTAAAGAAAGGCTCTGTCGTTCAGCGTCCCCGAACCCGCACTTTGACGGCTGTCCATGATGCCATGTTGGAGGATGTTGTGTATCCTGCAAAGATTGTTGGCAAACGGGTTTTCTTAGATCCCAAGGAGCGCAATAACACCGAGTACAAGATGGAGACTTTTTCTGGAGTTTACAGGAAGCTTACTGGAAAAGATTTAGTATTTGAGTATCCAATTGCAGAATCCTGA 423 0.4444 MYTSRKKIHKDKDAEPTEFEEAVAQYLFNLENTYQHSARLIFRELEKKFIGKDVVLIATRRILRPLKKGSVVQRPRTRTLTAVHDAMLEDVVYPAKIVGKRVFLDPKERNNTEYKMETFSGVYRKLTGKDLVFEYPIAES 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02251 140 PANTHER 40S RIBOSOMAL PROTEIN S7 1 36 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pumo2g02251 140 Pfam Ribosomal protein S7e 34 135 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02251 Pumo-Chr2 47823332 47830487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02251 1 140 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 52.356 8.47e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02251 K02993 - gmx:100500684 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02251 2 47823332 47830487 Pumo6g02966 6 70424458 70427330 ECH
Pumo2g02251 2 47823332 47830487 Pumo2g02251 2 47823332 47830487 ECH