Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02249 ATGAAAATAAGGGAGTTCAGTTGGGTGAGGGCGAGAGAGTGGAAAGGGAAGTTAATCGAATCGGGGGTGGGTGAGGTCAGAGGTGGAAGTAAGAGCGAAATTGAAAAGTTTTGGAGAATGGCGGCCAGCAAATGCAATTCAGCTACACCTCTCATCCACGTGCCCCCTAAATCTCTTATTTTCTTACACGAATGGTGGCTTGTCAAGCAACGCAAGGGTTTAGCCGTTGGCGGGGTTGCTTCCGTCGAGAGAGATAGAGAAAGAGTGTTTTTGTCTAGCGTGATTGCAGAGAGAGAAGAGGCCAATGTCCTCCACTCTGAAGATGGCATCACTATTCTTTTCCGTGGTTTCATTAACACCTCTCGTTCATCTCAAAATGGCGTCCCCTTAGAGGTATGTCAACACTTCCTTGTTGGATTTCCACACGATTGGAAGAAGTATTCAGATATCGATGGGGTTACTGCTTTTGGTGACTCAAGTGCTTGTTCAAAGAAAAGGGATGATGATGCTTTGCCATTTTCTATTAGCGATAATGATTTCACCAAGAGACAGGATTCTATATTGTCCAATAATTGTTTGGCACCAAAGAAAATTTGCAATGGACTGGGAATTTCTTTTGGGAATGATTCCAAGCAATCTGAATCAACTAATAACATGGAATGTAGCATTGTCATGAAGACTATGGAATGTGAATGTAACAATACAGCGAGTCTTAATTCGTCCCAGCTGCAGGTTGACATGTACAATGGTGAAAATGGAATCTCAGATGTTGCAGTCGAAAGCCAAGCTGGAAATAAAAAAAGTGGTCAATCCTTCATGGGTATGTTTGATTCTAACAGGTGTACAGGCCCTGTTAAACCTCCAACTTCCACAAAGAAAATGAAAAAAGACCAGTTTTCAGGTGACGGCAAGGAGAAGCAACGTATTAGACAAAATATAGTATTGGATGCCAGCAATTCCTGTAATAGGATGGTTACGAGAAGCATTTCCAAAAGAAGTCACACAATGCCTAAAGATGAGAAAGCTACAATAGCCACTGTTATTTCTCCAGTGAGGAGATCTCCCAGGCTATATAGTCGGGATGGAGACTCTGACCTCGACTTCCAGGATGGAACTGCCTTGAAGGGCACCCTTTTGGCCTGTGTCTTGCTCGTCGGTATTGTTGGCGGTTTTGCTTCCGTTGGCTATATCTACAAGGACCAAATCAATTCCTTCTTGAACCAGCTCTCCATTTTCATTGAAGGTTATGGTCCTGCTGGATATGCATTATTCGTTGCCGTCTATGCTGGATTGGAGGTATCAATGCCTTATTATATTTCATTCCATCTTCCTTTGTCCAAAATTAACCTCACTATCAACACCTCATACTATGAGCATCTACTACATATCACCTTCAACGTGTAA 1404 0.4266 MKIREFSWVRAREWKGKLIESGVGEVRGGSKSEIEKFWRMAASKCNSATPLIHVPPKSLIFLHEWWLVKQRKGLAVGGVASVERDRERVFLSSVIAEREEANVLHSEDGITILFRGFINTSRSSQNGVPLEVCQHFLVGFPHDWKKYSDIDGVTAFGDSSACSKKRDDDALPFSISDNDFTKRQDSILSNNCLAPKKICNGLGISFGNDSKQSESTNNMECSIVMKTMECECNNTASLNSSQLQVDMYNGENGISDVAVESQAGNKKSGQSFMGMFDSNRCTGPVKPPTSTKKMKKDQFSGDGKEKQRIRQNIVLDASNSCNRMVTRSISKRSHTMPKDEKATIATVISPVRRSPRLYSRDGDSDLDFQDGTALKGTLLACVLLVGIVGGFASVGYIYKDQINSFLNQLSIFIEGYGPAGYALFVAVYAGLEVSMPYYISFHLPLSKINLTINTSYYEHLLHITFNV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02249 467 MobiDBLite consensus disorder prediction 274 306 - -
Pumo2g02249 467 MobiDBLite consensus disorder prediction 290 306 - -
Pumo2g02249 467 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 60 251 - -
Pumo2g02249 467 Pfam SANTA (SANT Associated) 60 147 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02249 Pumo-Chr2 47805296 47808873 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo2g02249 SANTA 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02249 - - gmx:102668053 392.119