Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02187 ATGAACATGGCTTCAACTCATTTCTTCCTCCTTCAGCTCCTAGTTGCATTTTGCTTTGTCTCTTCAGCTTTTGGAGCCACTCTGCCAGAAGATGAAGTACAAGCTCTGAAGGACATAGGTGAGGCACTGGGAAGAAGGATTGGAATTTCAGTGTTGATCCATGCAGCGGAGAACGCAACTGGACATCGCATACTAAAACTTTTGAAAGTGCAAAATCTCCGAGGCACTCTCCCGCTAGCACTGGTCAGGTTGCCTTATCTTCAAGAAATGACCCTGGAATTCAATCAACTGTCTGGAAATCTTCCTCCTGAGCTTGGGAATCTTCCAAATATTCAGAGATTGCTACTTACCTCCAACATTTTTACTGGAGAATTACCTGCAACATTTGCAAGACTCACTACCTTGCAGGAAGTAGTGATTCAAGGAACTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCACTGCTTGAAAGTTTAACTGACTTGAGAATTAGTGATCTAAATGGATCTGACTATTTTCCTTTTCCACAACTCAACAATCTCACAAATTTGAAAATTTTGATTCTGAGGAGTTGCAACATTAATGGAACAATACCTGAATATCTTGGGACTATATCTAGTTTACAAACCTTAGACCTCAGTTTTAACAAATTAAGTGGACAAATTCCAAGCAGCTTTGAGTATGGCCTAAGAAAGACAGATTATATAGGATCCGTTTCATGTTTAAGAAGTGTTGCCTGTCCTAAAGTATCATACTCTCTTCATATAAATTCTGGGGGAAAGCAAATAACAGTCAATGGAAATGAAACATACGATGATGATACAAATACAGCAGGACCAGCTAGATTCCACCTTGGTGGAAAAAATTGGGGATTTAGCAGCACTGGTCACTTCATGGATAATGACCGTGCAGAATATTCTATTTGGCTAAATCAGTCTAAGCTTTCCATGGCTGATGCTGAATTATACATGGATGCACGTGTTTCTCCCATTTCTCTTACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACGGTGAATCTACACTTTGCAGAGGTCATGTTCAGTGATGATCAAACATATAACAGCCTAGGAAGGCGCATATTTGATGTCTACATTCAGGGAAATATGGTGCTAAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTAATAAAAAAGTCACAAAATCATTCACCATTGTGATTAGTAGTAACACATTGGAAATCCGCTTATATTGGGCTGGAAAAGGGACAATTGGTATTCCATTTAAGTCAGTATATGGTCCTCTTATATCAGCTATATCTGTAAATCCAGACTTCACCCCTCCTTCAGAAAATGGAAGTAGCATGTCTGCAGGGTCTGTGGTTGCAATTGTGGCTGGTGTAGTAGTTTTTCTTGTGCTGGTGTTTGGTATACTTTGGTGGAGAGGTTGTCTAGGACAGAAAAGTTCTTTAGCAAAAGAGCTAAAGGGTTTAAAATTGCAAATGGGTGTATTTACCTTACGACAAATCAAAGCAGCAACAAACAACTTCAATAAAGCCAACAAAATTGGAGAAGGAGGGTTTGGTCCTGTGTATAAGGGAAATTTATCAGATGGGACAATAATAGCAGTCAAGCAGCTTTCTTCTAAATCAAGGCAAGGGAATCGCGAGTTTCTAAATGAGTTAGGCATGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTCCATGGCTGTTGTGTCGAGGGAGATCAGTTATTGTTGGTATATGAATATATGGAAAACAACAGTCTTGCTCGTGCTTTGTTTGGTCCAGAAGAACACCAAATAAAATTGGATTGGCGAACAAGGCAAAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAGGAATCGAGATTGAAAATTGTCCATAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTAAACCCAAAGATATCTGACTTTGGTTTGGCCAAGCTCGATGAAGAGGACAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATACATGGCTCCCGAGTATGCTATGCATGGTTATTTGACAGAGAAAGCAGATGTCTATAGCTTTGGAGTTGTGGCCTTGGAAATTGTAAGTGGGAGGAGCAATATGATTCAACGGCAAAAAGAAGAAGCATTCCATCTTCTTGATTGGGCACATATGTTGAAAGAGAAAGGAAATCTAATGGAGCTAGTTGATAGAAGATTGGGTTTGGACTTCAACAAAAAGGAGGTTACGGCGATGATTAATGTGGCTCTTTTATGCACCAATGACACTGCCTCCCTCAGGCCAATAATGTCCTCAGTGGTAAGCATGCTTGAAGGTAGATCTGTAGTTCAGGAGGTGGTTTCAGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGCGATGCGACGGCATTACCAAGAGATAGAAGAAAATATGTTAAGTGAGACTCAAAATCAGAGTCTCTCAATGGATGACACATTGGCCACTTCATCTACATCTGCAACAGATCTCTATCCTGTAAACATGAATTCTTCTTACTGGGAGAAAAGGGGTTGGTGA 2583 0.4042 MNMASTHFFLLQLLVAFCFVSSAFGATLPEDEVQALKDIGEALGRRIGISVLIHAAENATGHRILKLLKVQNLRGTLPLALVRLPYLQEMTLEFNQLSGNLPPELGNLPNIQRLLLTSNIFTGELPATFARLTTLQEVVIQGTGLSGPIPSGISLLESLTDLRISDLNGSDYFPFPQLNNLTNLKILILRSCNINGTIPEYLGTISSLQTLDLSFNKLSGQIPSSFEYGLRKTDYIGSVSCLRSVACPKVSYSLHINSGGKQITVNGNETYDDDTNTAGPARFHLGGKNWGFSSTGHFMDNDRAEYSIWLNQSKLSMADAELYMDARVSPISLTYYGFCLGNGNYTVNLHFAEVMFSDDQTYNSLGRRIFDVYIQGNMVLKDFNIAEEAGGVNKKVTKSFTIVISSNTLEIRLYWAGKGTIGIPFKSVYGPLISAISVNPDFTPPSENGSSMSAGSVVAIVAGVVVFLVLVFGILWWRGCLGQKSSLAKELKGLKLQMGVFTLRQIKAATNNFNKANKIGEGGFGPVYKGNLSDGTIIAVKQLSSKSRQGNREFLNELGMISALQHPCLVKLHGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIKLDWRTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTEKADVYSFGVVALEIVSGRSNMIQRQKEEAFHLLDWAHMLKEKGNLMELVDRRLGLDFNKKEVTAMINVALLCTNDTASLRPIMSSVVSMLEGRSVVQEVVSESSEALDEKKLEAMRRHYQEIEENMLSETQNQSLSMDDTLATSSTSATDLYPVNMNSSYWEKRGW 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02187 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pumo2g02187 860 SUPERFAMILY L domain-like 65 226 - -
Pumo2g02187 860 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 251 441 - -
Pumo2g02187 860 CDD STKc_IRAK 519 786 - -
Pumo2g02187 860 Gene3D Transferase(Phosphotransferase) domain 1 589 808 - -
Pumo2g02187 860 Pfam Protein tyrosine and serine/threonine kinase 516 783 IPR001245 GO:0004672|GO:0006468
Pumo2g02187 860 SUPERFAMILY Protein kinase-like (PK-like) 497 788 IPR011009 -
Pumo2g02187 860 SMART serkin_6 513 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02187 860 Gene3D - 252 441 - -
Pumo2g02187 860 Gene3D Ribonuclease Inhibitor 58 251 IPR032675 -
Pumo2g02187 860 ProSiteProfiles Protein kinase domain profile. 513 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02187 860 Coils Coil 806 826 - -
Pumo2g02187 860 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 58 823 - -
Pumo2g02187 860 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 482 588 - -
Pumo2g02187 860 Pfam Malectin domain 253 436 IPR021720 -
Pumo2g02187 860 Gene3D Phosphorylase Kinase; domain 1 481 588 - -
Pumo2g02187 860 Pfam Leucine Rich Repeat 207 227 IPR001611 GO:0005515
Pumo2g02187 860 FunFam Putative LRR receptor-like serine/threonine-protein kinase 589 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02187 Pumo-Chr2 45744663 45756700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02187 20 844 Receptor kinase-like Gene Family AT1G53420 50.105 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g02187 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02187 - - cam:101501658 1019.22