LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g02185	ATGGACAGGGTATTGGAGTTCAATCAGTTATCCGGAAATCTTCCTCCAGAGCTTGGGAACCTTACCCAGATTGAAATACTGCATCTAACATCCAACAATTTCACTGGAGAGTTACCTGCAACATTGGCTAGGCTCACAACATTGAAGCATGTTGTGATGCAAGGGAGTGGTTTGAGTGGGCCAATTCCTTCGGCAATTTCAATTCTAAGAAACCTTACTGACTTGAGGATTACCGACTTGAATGGATCTGATTCACCATTTCCACATCTTGATAATATGACAAATTTGGAAACATTAATATTGAGGAGTTGCAACATTATTGGATCCTTTCCAGAGTATCTTGGAAAATTGACTACATTGGTAGTAATAGACGTTAGCTACAACAAATTAACTGGATCAATTCCGAGCTTTGATAGTCTTCTGCACTTGAATATGCTATTTTTAGAAGGGAATCTTCTCACTGGATTGCTACCTCGGCGGATAGATGAACCTCACTTTGTGAACTTGTTTGCTTCATTTTCTAATGGAAACAGCTTATTGAGTGGACCGGAGACTATTTCCTTAGATTATACTTCGTATTCTCTCTATATAAACTGTGGTGGAAAGCTTGTAACTTCTGATGGAAATAAGACATATGATGATGACTCGGGTGAGATTGGACCAGCAAGCTTTCATAACCCTGGAATGGACTGGGCAATTATCAACAATGGTCATTTCTTTGATACCGAACACCCAAACTACTATACTTGGACTAATACAACTAAGCTTGCAATGGACAATGCTGAACTATACATGAATGCACGTGTTTCTCCAACTTCTTTGTCCTATTATGGATTTTGCATGGGAAATGGAAACTACACGGTAAATCTCCATTTTGCAGAAATAATGTTTAGTGATGATAAAACATATAGCAGCCTTGGAAGGCGAGTATTTGACATCTACATTCAGAGAAAGTTGGTGGTCAAGGATTTCAATATTGCCAAAGAAGCAGGTGGTGTTGGTAAGGCAATAATTAAAAATTTCACAGCTGTTGTGACTAGTAACGCCTTAGAGATTCGATTATATTGGGCTGGGAAAGGAACCACTTCTATTCCATTTAGATCAGTTTATGGTCCTCTTATATCAGCTATATCTGTTGATCCCAACTTTATACCCCCGTCAGAAAGTGGTACTAGTAGCATATCCATAGAAAGTGGTAGCAGTAGCATATCTGTAGGGATTGTGGTTGCAATTGTGGTTACTGGAGCAATTATTATCATCTTGGTATTTGGTATATTGTGGTGGAAGGGCTTTTTAGGACGAAAAATATCAATGGCCAGAGAAATAAAGGGTTTAGAATCGCAAACTGGTTTATTTACTCTACGACAAATCAAGGCAGCAACAAATAACTTTGACAAAGCCTTCAGGATTGGAGAAGGAGGGTTTGGTCTTGTTTACAAGGGTGTACTATTAGATGGCACTGTAGTAGCAGTTAAGCAGCTTTCTACTAGGTCAAGGCAAGGGAATCGTGAATTTGTAAATGAGATAGGCCTGATCTCTGCCTTGCAACATCCTTGTTTAGTTAAGCTTTATGGCTATTGTATGGAAGAGGATCAACTGTTACTAATATATGAATACATGGAAAACAATAGTCTTGCTCATGCTTTATTTGCCAAAAATGATGACCATGAGAAATATCAATTGAGATTGGATTGGCGAACAAGGCAGAGGATTTGTGTTGGTATTGCTAAAGGCTTGGCTTACCTTCATGAAGAGTCCAGACTAAAGATTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTGGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGATGGGAACAAAACCCATTTGAGCACTAGAATAGCTGGCACTTATGGGTACATTGCTCCTGAGTATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCATTGGAAATTGTTAGTGGGATGAGCAACACCATTAGCCAGCCTACAGAAGAATGCTTCTCTCTCCTTGATATGGTGCATCTAATGAAAGAAAAAGGTAATCTAATGGAAGTTGTGGATAAGAGGTTGGGTGAAGACTTCAACAAAAAGGAGGCAATGGTGATGATAAATGTAGCTCTTTTATGCACCAAAGTCTCTCCAGCACTCAGGCCAACCATGTCTTCTGTGGTAAGCATGCTCGAAGGTAGAACATGTATTCAAGAGGTGGTGTTAGACAAAAGAGAGGTGTTGGATGATAAGAAATTTGAGATGATGCAACAGTATTACCAACATAGAGGAGAAAATAACATAATTGAATCTCAGAGCCAGAGTGTCCCTACTACAGAAGAAGCTTCTCTATTTATATCTGATACGGGTTCTTCTAGTAGGGAAATTAGAAATTAG	2421	0.3916	MDRVLEFNQLSGNLPPELGNLTQIEILHLTSNNFTGELPATLARLTTLKHVVMQGSGLSGPIPSAISILRNLTDLRITDLNGSDSPFPHLDNMTNLETLILRSCNIIGSFPEYLGKLTTLVVIDVSYNKLTGSIPSFDSLLHLNMLFLEGNLLTGLLPRRIDEPHFVNLFASFSNGNSLLSGPETISLDYTSYSLYINCGGKLVTSDGNKTYDDDSGEIGPASFHNPGMDWAIINNGHFFDTEHPNYYTWTNTTKLAMDNAELYMNARVSPTSLSYYGFCMGNGNYTVNLHFAEIMFSDDKTYSSLGRRVFDIYIQRKLVVKDFNIAKEAGGVGKAIIKNFTAVVTSNALEIRLYWAGKGTTSIPFRSVYGPLISAISVDPNFIPPSESGTSSISIESGSSSISVGIVVAIVVTGAIIIILVFGILWWKGFLGRKISMAREIKGLESQTGLFTLRQIKAATNNFDKAFRIGEGGFGLVYKGVLLDGTVVAVKQLSTRSRQGNREFVNEIGLISALQHPCLVKLYGYCMEEDQLLLIYEYMENNSLAHALFAKNDDHEKYQLRLDWRTRQRICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDDGNKTHLSTRIAGTYGYIAPEYAMHGYLTDKADVYSFGIVALEIVSGMSNTISQPTEECFSLLDMVHLMKEKGNLMEVVDKRLGEDFNKKEAMVMINVALLCTKVSPALRPTMSSVVSMLEGRTCIQEVVLDKREVLDDKKFEMMQQYYQHRGENNIIESQSQSVPTTEEASLFISDTGSSSREIRN	806

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g02185	806	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	433	539	-	-
	Pumo2g02185	806	Gene3D	Transferase(Phosphotransferase) domain 1	540	760	-	-
	Pumo2g02185	806	Pfam	Malectin domain	194	377	IPR021720	-
	Pumo2g02185	806	Pfam	Protein kinase domain	469	736	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo2g02185	806	SUPERFAMILY	L domain-like	5	161	-	-
	Pumo2g02185	806	ProSiteProfiles	Protein kinase domain profile.	464	749	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo2g02185	806	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	590	602	IPR008271	GO:0004672\|GO:0006468
	Pumo2g02185	806	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	192	382	-	-
	Pumo2g02185	806	Gene3D	-	196	381	-	-
	Pumo2g02185	806	Gene3D	Ribonuclease Inhibitor	3	195	IPR032675	-
	Pumo2g02185	806	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	5	778	-	-
	Pumo2g02185	806	Gene3D	Phosphorylase Kinase; domain 1	433	539	-	-
	Pumo2g02185	806	SMART	serkin_6	464	739	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo2g02185	806	ProSitePatterns	Protein kinases ATP-binding region signature.	470	492	IPR017441	GO:0005524
	Pumo2g02185	806	SUPERFAMILY	Protein kinase-like (PK-like)	448	740	IPR011009	-
	Pumo2g02185	806	MobiDBLite	consensus disorder prediction	787	806	-	-
	Pumo2g02185	806	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	540	751	-	-
	Pumo2g02185	806	CDD	STKc_IRAK	470	741	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g02185	Pumo-Chr2	45617980	45628794	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo2g02185	4	801	Receptor kinase-like Gene Family	AT1G53420	50.894	0.0	789

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pumo2g02185		Pkinase	7.1e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g02185	-		-	gmx:100798947	1224.15