Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g02184 | ATGGGTTCCTTCTCTACATTTCCTCTTCTTTTTCTTCTTCTTCCTTTCTGCTTCGCTTCGTTCGTTCTAGGAGCCACTTTGCCAGAAGACGAAGTGGAAGCTCTGAGAGACATAGCTAAGACAATTGGGAAGAAGAATTGGGACTTCAGCGTAGATCCATGTAGCGGAAAGAGCAATTGGACATCTTCCACTCAATTGAAAGGTTCAGAAAATGATGTGACCTGTGATTGTTCCTTTGCTAATCACACTGTTTGTCATGTTGTAAGCGTCGTTTTAAAAGCACAAAATCTTTCGGGTAGTGTCTCACCGGAGTTTGTCAGATTGCCTTATCTCCAAGAAATTGACTTCGCCCTCAACTACCTTAATGGTACAATTCCTAAACAATTGGGATCCTTAAACCTTGTCAACATTTCCTTTTATGGAAACCGTCTAACTGGTCCAATCCCAAAGGAGCTTGGAAACATCACCACTCTAAAAGCTTTGGTATTGGAGTTCAATCAGTTATCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTACCCAGATTGAAATACTGCATCTAACCTCCAACAATTTCACTGGAGAGTTACCTGCAACATTGGCTAGGCTCACAACATTGAAGCATGTTCGTATTGGTGACAATCAATTCTCCGGAGCAATACCGAATTTTATACAGAGCTGGAGAAATCTTGAGATACTTGTGATGCAGGGGAGTGGTTTGAGTGGGCCAATTCCTTCTGGAATTTCAATTCTGAGAAACCTTACTGACTTGAGGATTACTGACTTGAATGGATCTGATTCACCATTTCCACAACTTAATAATATGACAAATTTGGAAACACTAATGTTGAGGAGTTGCAACATTACCGGATCCTTGCCTGAGCATCTTGGAAAATTGACTACTTTGCAAGTACTAGACGTTAGCTACAACAAATTAACTGGACCAATTCCGAGCAGTTTTGGTGGTTTTCAGAACTTGGATATGCTGTTTTTAGATGGGAATCTTCTCACTGGATCACTGCCTCAGTGGATAGATAAACCTGACTTTGTCGATCTCTCATATAACAATTTTAGCATCGACAACATAGAGCAGCTGACTTGCCAACAGGGAAGCGTGAATTTGTTTGCTTCATCTTTCAACGGAAACAGCTTAGGAAATATTGCATGTTTGTCAAACATTCGATGTCCTAAAACTTCGTATTCTCTTCATATAAACTGTGGTGGAAAGCTTGTAACTTTTGATGGAAATAAGACATATGATGATGACTCGGGTGAGACTGGACCAGCAAGATTTCGTAACCCTGGAAGGAACTGGGCACTTATCAACACCGGCCATTTCTTTGATAGTGGTCGTGAAGACTACTATACTTGGACTAATACAACTAAGCTTGCAGTGGACAATGCTGAATTGTACACAGATGCACGTGTTTCTCCAAATTCTTTGACCTATTATGGATTTTGCTTGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCAGAAATAATGTTTACTGATGATAAAACATATAGCAGCCTTGGAAGGCGTGTATTTGACATCTACATTCAGAGAAAGTTGGTGCTTAAGGATTTCAATATTGCAAAAGAAGCAGGGGGTGTTGGTAAGGCAGTCATTAAAAATTTCACAGCTGTTGTGACTAGTAATGCCTTGGAAATCCGATTATATTGGGCTGGGAAAGGAACCACTTCTATTCCATTTGGATCTGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCTGACTTTATACCCCCATCGGAAGGTGGTAGTAGTAGCATATCCATAGGGGTTGTGGTTGCAATTGTGGTTGCTGGAGCAATTATTATCATCTTGCTATTTGGTATATTGTGGTGGAAGGGCTTTTTAGGACGGAAAAGATCAGTGGCTGAAGTTTATGCAAAAAAAAAAGTCCTTCAGTTACTTGGGTACATTGCTCCTGAGTATGCAATGCATGGTTACTTGACGGACAAAGCAGATGTCTATAGTTTTGGGATTGTTGCATTGGAAATTGTTAGTGGGATGAGCAACAGCATTAGCCGGCCTACGGAAGAATGCTTCTCTCTCCTTGATTGGGTGCATCTCTTGAAAGAAAAAGGTAACCTAATGGAGCTTGTGGATAAGAGGTTGGGTGAAGACTTCAACAAAAAGGAGGCAATGGTGATGATCGATGTAGCTCTTTTATGCACCAAAGTCTCTCCATCTCTTAGGCCAACCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAGAACAGTTATTCAAGAGGTGGTGTCAGACACAAGAGAGGTATTGGATGATAAGAAGTTTGAGATGATGAGACAGTATTACCAAAATAGAGGAGAAAATAACATTATTGAGTCTCAGAGCCATAGTGTCCCTACTACAGAAGCTTCTGGACTTATATCTGATACGGGTTCTTCTAGTAGGGAAATTAGAAATTAG | 2463 | 0.4056 | MGSFSTFPLLFLLLPFCFASFVLGATLPEDEVEALRDIAKTIGKKNWDFSVDPCSGKSNWTSSTQLKGSENDVTCDCSFANHTVCHVVSVVLKAQNLSGSVSPEFVRLPYLQEIDFALNYLNGTIPKQLGSLNLVNISFYGNRLTGPIPKELGNITTLKALVLEFNQLSGNLPPELGNLTQIEILHLTSNNFTGELPATLARLTTLKHVRIGDNQFSGAIPNFIQSWRNLEILVMQGSGLSGPIPSGISILRNLTDLRITDLNGSDSPFPQLNNMTNLETLMLRSCNITGSLPEHLGKLTTLQVLDVSYNKLTGPIPSSFGGFQNLDMLFLDGNLLTGSLPQWIDKPDFVDLSYNNFSIDNIEQLTCQQGSVNLFASSFNGNSLGNIACLSNIRCPKTSYSLHINCGGKLVTFDGNKTYDDDSGETGPARFRNPGRNWALINTGHFFDSGREDYYTWTNTTKLAVDNAELYTDARVSPNSLTYYGFCLGNGNYTVNLHFAEIMFTDDKTYSSLGRRVFDIYIQRKLVLKDFNIAKEAGGVGKAVIKNFTAVVTSNALEIRLYWAGKGTTSIPFGSVYGPLISAISVDPDFIPPSEGGSSSISIGVVVAIVVAGAIIIILLFGILWWKGFLGRKRSVAEVYAKKKVLQLLGYIAPEYAMHGYLTDKADVYSFGIVALEIVSGMSNSISRPTEECFSLLDWVHLLKEKGNLMELVDKRLGEDFNKKEAMVMIDVALLCTKVSPSLRPTMSSVVSMLEGRTVIQEVVSDTREVLDDKKFEMMRQYYQNRGENNIIESQSHSVPTTEASGLISDTGSSSREIRN | 820 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g02184 | 820 | SUPERFAMILY | Protein kinase-like (PK-like) | 649 | 760 | IPR011009 | - | |
Pumo2g02184 | 820 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 269 | 360 | - | - | |
Pumo2g02184 | 820 | SUPERFAMILY | L domain-like | 81 | 358 | - | - | |
Pumo2g02184 | 820 | Gene3D | - | 397 | 588 | - | - | |
Pumo2g02184 | 820 | Gene3D | Ribonuclease Inhibitor | 264 | 386 | IPR032675 | - | |
Pumo2g02184 | 820 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase isoform A | 196 | 263 | - | - | |
Pumo2g02184 | 820 | Pfam | Malectin domain | 401 | 584 | IPR021720 | - | |
Pumo2g02184 | 820 | Gene3D | Transferase(Phosphotransferase) domain 1 | 629 | 777 | - | - | |
Pumo2g02184 | 820 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 18 | 623 | - | - | |
Pumo2g02184 | 820 | Pfam | Leucine rich repeat | 276 | 336 | IPR001611 | GO:0005515 | |
Pumo2g02184 | 820 | Pfam | Protein tyrosine and serine/threonine kinase | 641 | 754 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo2g02184 | 820 | Gene3D | Ribonuclease Inhibitor | 31 | 196 | IPR032675 | - | |
Pumo2g02184 | 820 | Gene3D | Ribonuclease Inhibitor | 197 | 263 | IPR032675 | - | |
Pumo2g02184 | 820 | MobiDBLite | consensus disorder prediction | 787 | 820 | - | - | |
Pumo2g02184 | 820 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 399 | 589 | - | - | |
Pumo2g02184 | 820 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A | 31 | 190 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g02184 | Pumo-Chr2 | 45496003 | 45512497 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g02184 | 644 | 815 | Receptor kinase-like Gene Family | AT1G53420 | 47.159 | 1.45e-41 | 162 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo2g02184 | Malectin | 9.8e-44 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g02184 | - | - | gmx:100798947 | 947.577 |