Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02177 ATGAGTGATTATGAAGAGTTGACATCTGGTGTACTATCACATGCTCAAGGACATCCCTTAGCAATTGAAGTATTAGGCTCATCTTTGTTTAGAAGAAATATTTCACAATGGAGAAGTGCATTACTTAGGTTAAGAGAGAATAAAAGTAAAAATATTATGGATGTGTTGCGAATAAGCTTTGATGCATTGGATGACATAGACAAGAAAATTTTCCTAGACATTGCTTGCTTCTTCAACAATCATGAAGAGAAATATGTGAAGGAAATTCTGGATTTTCGGGAATTTCATCCCGAATATGGCCTTAGAGTTCTTGTCGATAAATCACTTATAACTATTAAGATGGGGAGGATTCATATGCATAGCTTGTTGATAGATTTGGGCAGGTGTATTGTTCAAGAAAAATCACCTAAGGAGCCAAGAAAATGGAGCAGGTTGTGGGATTATCGAGATTTTTGCAAAGTCATGTCAAAGAATATGGTAGCAAAAAATCTTGAAGCCATAGTTATTAACTCTCAAGGCGAATTTCCTCAAATAACAATGAGGGTTGATGCATCTATCGAAAATGAGTAA 570 0.3526 MSDYEELTSGVLSHAQGHPLAIEVLGSSLFRRNISQWRSALLRLRENKSKNIMDVLRISFDALDDIDKKIFLDIACFFNNHEEKYVKEILDFREFHPEYGLRVLVDKSLITIKMGRIHMHSLLIDLGRCIVQEKSPKEPRKWSRLWDYRDFCKVMSKNMVAKNLEAIVINSQGEFPQITMRVDASIENE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02177 189 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 170 IPR044974 GO:0006952
Pumo2g02177 189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 74 IPR027417 -
Pumo2g02177 189 SUPERFAMILY "Winged helix" DNA-binding domain 51 155 IPR036390 -
Pumo2g02177 189 Gene3D - 1 64 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02177 Pumo-Chr2 45355013 45355685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02177 6 147 WRKY Transcription Factor Family AT5G45050 38.462 2.20e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02177 - - gmx:100814717 251.521