Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02173 ATGGCAAATCCTCCTCCTCTTAAGCTTCTTATTTGCAAGCTATTATTATTACTCTTCTCTCAAATTAGCTACGCGACAGACACCATCACAGAGGTTCAGTCACTTTCCGATAATGGCAGCACCTTGGTTTCCAACGACGGCACCTTTGAGTTGGGTTTCTTCAATCCCGGCAGTTCCAATAACCGCTACGTCGGAATCTGGTACAAAAACATCCCTCAAACAGTGGTTTGGGTCGCCAACCGTGACAACCCGATCAGAGAAAACAACTCCAGCAAGTTGGCCATAAGCCAAGACGGAAACCTCGTACTTCTCAGCTACATTAACCAGTCTCTTCTTTGGACAACAAACGCAACAAAAAAAGCTTCGAGTCCGATCGTGCAGCTCTTGGACACCGGAAACTTGGTAGTAAAAGATAATAACAACGATGAAGAGAGTGTTTTTCTGTGGCAAAGCTTCGACCATCCTTGTGACACGCTGTTGTCGGGGATGAAGCTCGGGTGGGACTTGAGAACGGGTCTTAACCGGCGTCTCACCGCTTGGAAGAACTGGGACGACCCGTCTTCGGGGGAGCTCGTTTGGGAAGTGGTGATCGGAAACAACCCCGAAATCGTGATGTGGAAGGGCAAAACTGATTACTTTAGGACCGGGCCTTATACTGGGAACATGTTCAGTGGTGTGTATGCGCCCAGGAATAACCCACTTTACGATTGGAGATTTGTCAATAACCAAGACGAGGTGTATTTTCAATACACCCTCAGGAACAGTTCTGTGATTTCTATAATTGTAATGAACCAAACCCTTTATCTTCGTCAACGCCTCACTTGGATTCCTGATTCCAATTCTTGGAGTGTTTACCAATCCTTGCCGCTAGATAGTTGCGATGTTTACAACACTTGTGGGTCCAATGGAATTTGTTTGATTGCTGGGTCGCCAATTTGCCAGTGCTTAGAGGGGTTCGAGCCGAAATCGCCCCAACAGTGGAACGCCATGGATTGGAGACAGGGGTGTGTGCGCAGTGAAGAGTGGAGCTGTGGGGTCAAAAACAAAGACGGTTTTCGTAGAATTGCTAGTGTGAAATTGCCAAACACTACGTTTTCTTGGGTTAGTGAAAGTTTGACACTTGAGGAGTGTAGGGCCAAATGTTTGGAAAATTGTTCGTGCACGGCTTATTCGAACTTGGACGTGAGAGGAGGAGGTAGCGGGTGTTCCATTTGGGTTCGTGAACTTGTTGACATTAGAGTTGTAGAAAGTGGGCAAGATTTATATGTTCGAATGGCCACTTCGGATACGGGTGGTAAACATGGGCAGCGGAAAAAAATAATCATGGCAGTTACAATCACTGCAGCTTCATTGGTCCTTGTGATGTTATTAGCATTCTGCATTTACACGACCAAGAAAAAATATAAAGGAAAAAAAGAGACAACGATGTCGATTGAGCAGAAAGACCAAGGCGGGCAAGAAGACTTGGAGCTTCCTTTCTTTGACCTTGCTACCATAGTTAATGCCACTAATAATTTTTCAATTGACAATAAGCTCGGTGAAGGTGGTTTTGGGCCAGTATACAAGGGTTTATTCGTAGACGGACAAGAAATTGCAATCAAGAGGCTTTCAAGAAGTTCAGGACAAGGATTGAAAGAATTTAGGAATGAAGTTATATTGTGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTCTTGGTTATTGCATTGAAGGAGAAGAAAAAATGTTACTCTATGAATACATGCCCAACAAAAGTCTTGATTTAATTCTTTTTGATTCCATTCAAAGTAAATTATTAGATTGGCCAATGCGTTTTAACATTTTGAATGCAATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTAAAAGCTAGTAATATATTACTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCCTTGCTAGAATGTGTGGAAGTGATCAAGTGGAAGGGAATACAAGCATCATAGTTGGAACACATGGTTACATGGCACCTGAATATGCCATGGATGGATTATTCTCTATAAAATCAGACGTGTTCAGCTTTGGAGTATTAATGCTAGAAATTGTTAGTGGAAAGAAAAATAGAGCATTTACCTACCAAGACCACAATCATAATCTTATTGGTCATGCATGGAGATTATGGAAAGATGGTACACCAGAGCAATTTATTGATGCTTGTTTGGCAAACTCATATAGTATATTTGAAGTTGTACGGTGCATTCAAATTAGTCTTCTATGTCTACAACATCATCCAGATGATAGGCCGAACATGACATCAGTTGTTGTGATGTTGTCTAGTGAAAATGCTTTACTTGAACCCAAGGAGCCTGGTTTCTTAATTAGAAGGGTCTCAAATGAAGGAGAACAATCTTCTAATAGACAATCTTCTTCAATCAATGAAGTAACTAGAGAAATGGCCAATATTCCTCTTGTTATGCTTCTCATAGTTTGCAAGCTATTATTATTACTCTTCTCTCAGATTTGCTACGCAGCAGACACCATCACAAAGGGTCAGTCTCTTCCCGATGATGGCAGCACCTTGGTTTCCAACGACGGCACCTTCGAGTTGGGTTTCTTCAACCCCGGGAGTTCCAATAACCGCTACGTCGGAATCTGGTACAAAAAGATTGCCGTCAGAACGGTGGTTTGGGTCGCCAACCGCGACAACCCGATCAGAGACGACAACAACTCAAGCAAGTTGGTCATAAGCCAAGACGGAAACCTCGTGCTTCTCAGTTACATTAACCAGTCTCTTATTTGGATGACAACAACAAAAAAGGCTTCGAGCCCAATCGTGCAGCTCTTGGACACTGGAAATCTCGTAATTAAAGATGGTAATGACAACGAAGAAGAGAGTGTTTTTCTGTGGCAAAGCTTTGACTACCCTTGTGACACGCTACTGCCGGGGATGAAGTTTGGGTGGGACCTGAGAACCGGTCTTAACCGGCGTCTTACTTCTTGGAAAAGCTGGGATGACCCATCTTCAGGGGACTTCACTTGGGGAGTGGAATTAGGAAGCAACCCTGACATTGTGATGTGGAAGGGTAACGCTGAGTACTTCAGGACTGGGCCTTATACTGGGAACATGTTCAGTGGAGTGTATGGGCCCAGGAATAACCCACTTTATGATTACAAATTTGTCAATAACACAGATGAAGTATATTACCAATACACCCTCAGAAACAGTTCGGTTGTTACCATAATTGTTATGAACCAAACTCTCTATCTTCGTCACCGCCTTACTTGGATCCCCGAGGCCGAAGCTTGGAGCATTTACCAATCCTTGCCGCGAGATAGTTGTGACGTGTATAACACTTGTGGGTCCAATGGAATTTGTGTGATTGCTGGGTCGCCGATTTGCGAGTGCTTGGATGGGTTCGAGCCGAAATCGCCCCTGCAGTGGAACGCGATGGACTGGAGAGAAGGATGTGTGCGTAGTGAAGAGTGGAAATGTGGGGTGAAAAATAAAGATGGTTTTCGAAGATTTGCTGGTATGAAATTGCCAAATACTACATTTTCTTGGGTTAATGAAAGTATGACACTTGAGGAGTGTAGGGCCAAATGCTTGGAAAATTGTTCGTGCAAGGCTTATTCGAACTTGGACACGAGGGGAGGAGGTAGTGGGTGCTCTATTTGGGTTGGTGAGCTTGTTGATTTGAGAGTTATAGAAAGTGGGCAAGATTTGTATGTTCGAATGGCCACTTCGGATACAGCAGATGGTAAACATGGAGAACGGAAAAAGGTAATCGTGGCGGTTTCAGTCATAGCATCGTTGGTGCTTGTGATGTTATTAGCATTTTGCATTTACACGACAAAAAGAAAATATAAAGGGAAAACGAAAACAAGAATGTTGACAGAAGATAAAGATGGAGGCAGACAAGAAGATTTGGAGCTTCCTTTCTTTGATCTTGCTACAATAGTTAATGCTACTAATAATTTTTCAATTGAGAATAAGCTCGGTGAAGGTGGTTTTGGTCCTGTATACAAGGGTATTTTAGTAGATGGACAAGAAATTGCAATCAAAAGGCTTTCACGAAGTTCAGGACAAGGATTAAAAGAATTTAGAAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTCAAGGTTTTGGGTTATTGCATTCAAGGAGAAGAGAAAATGTTACTCTATGAATACATGCCCAACAAAAGTCTCGATTTATTTCTTTTTGATTCGGAGCAAAGTAAATTTTTAAATTGGCCACTGCGCTTTAACATTTTGAATGCGATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTAAAGGCAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCCTTGCAAGAATGTGTGGAAGCGATCAAGTTGAAGGGAGTACAAGTATCATAGTTGGGACACATGGTTACATGGCACCTGAATATGCCATTGATGGACTATTCTCAACAAAATCGGATGTGTTTAGCTTTGGAGTGTTATTGCTAGAAATTGTTAGTGGAAAGAAAAGCAGAGCATTTACCTACCAAGACAACAATCATAATCTTATTGATCATGCATGGAGATTGTGGAAAGAAGGTACTCCAGAGCAATTGATTGATGCACATTTGGCAAACTCGTGTAATATATTTGAAGTTATACGGTGCATTCAAATTAGTCTTCTATGTCTACAACATCATCCAGACGATAGGCCGAACATGACATCAGTTGTTGTGATGTTGACCAGTGAAAATGCTTTACAAGAACCTAAGGAGCCTGGTTTCTTAATTAGAAGGGTTTCAAACGAAGGAGAACAATCTTCTAATAGACAAACATCTTCTTCAATCAATGAAGTATCTATCTCACTTTTAAATGCTAGATAA 4932 0.4161 MANPPPLKLLICKLLLLLFSQISYATDTITEVQSLSDNGSTLVSNDGTFELGFFNPGSSNNRYVGIWYKNIPQTVVWVANRDNPIRENNSSKLAISQDGNLVLLSYINQSLLWTTNATKKASSPIVQLLDTGNLVVKDNNNDEESVFLWQSFDHPCDTLLSGMKLGWDLRTGLNRRLTAWKNWDDPSSGELVWEVVIGNNPEIVMWKGKTDYFRTGPYTGNMFSGVYAPRNNPLYDWRFVNNQDEVYFQYTLRNSSVISIIVMNQTLYLRQRLTWIPDSNSWSVYQSLPLDSCDVYNTCGSNGICLIAGSPICQCLEGFEPKSPQQWNAMDWRQGCVRSEEWSCGVKNKDGFRRIASVKLPNTTFSWVSESLTLEECRAKCLENCSCTAYSNLDVRGGGSGCSIWVRELVDIRVVESGQDLYVRMATSDTGGKHGQRKKIIMAVTITAASLVLVMLLAFCIYTTKKKYKGKKETTMSIEQKDQGGQEDLELPFFDLATIVNATNNFSIDNKLGEGGFGPVYKGLFVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVLGYCIEGEEKMLLYEYMPNKSLDLILFDSIQSKLLDWPMRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGSDQVEGNTSIIVGTHGYMAPEYAMDGLFSIKSDVFSFGVLMLEIVSGKKNRAFTYQDHNHNLIGHAWRLWKDGTPEQFIDACLANSYSIFEVVRCIQISLLCLQHHPDDRPNMTSVVVMLSSENALLEPKEPGFLIRRVSNEGEQSSNRQSSSINEVTREMANIPLVMLLIVCKLLLLLFSQICYAADTITKGQSLPDDGSTLVSNDGTFELGFFNPGSSNNRYVGIWYKKIAVRTVVWVANRDNPIRDDNNSSKLVISQDGNLVLLSYINQSLIWMTTTKKASSPIVQLLDTGNLVIKDGNDNEEESVFLWQSFDYPCDTLLPGMKFGWDLRTGLNRRLTSWKSWDDPSSGDFTWGVELGSNPDIVMWKGNAEYFRTGPYTGNMFSGVYGPRNNPLYDYKFVNNTDEVYYQYTLRNSSVVTIIVMNQTLYLRHRLTWIPEAEAWSIYQSLPRDSCDVYNTCGSNGICVIAGSPICECLDGFEPKSPLQWNAMDWREGCVRSEEWKCGVKNKDGFRRFAGMKLPNTTFSWVNESMTLEECRAKCLENCSCKAYSNLDTRGGGSGCSIWVGELVDLRVIESGQDLYVRMATSDTADGKHGERKKVIVAVSVIASLVLVMLLAFCIYTTKRKYKGKTKTRMLTEDKDGGRQEDLELPFFDLATIVNATNNFSIENKLGEGGFGPVYKGILVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVLGYCIQGEEKMLLYEYMPNKSLDLFLFDSEQSKFLNWPLRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGKKSRAFTYQDNNHNLIDHAWRLWKEGTPEQLIDAHLANSCNIFEVIRCIQISLLCLQHHPDDRPNMTSVVVMLTSENALQEPKEPGFLIRRVSNEGEQSSNRQTSSSINEVSISLLNAR 1643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 152 - -
Pumo2g02173 1643 SMART blect_4 851 975 IPR001480 -
Pumo2g02173 1643 SMART blect_4 33 155 IPR001480 -
Pumo2g02173 1643 ProSiteProfiles Bulb-type lectin domain profile. 844 968 IPR001480 -
Pumo2g02173 1643 CDD PAN_AP_plant 343 426 - -
Pumo2g02173 1643 SMART ntp_6 347 425 IPR003609 -
Pumo2g02173 1643 SMART ntp_6 1167 1245 IPR003609 -
Pumo2g02173 1643 Pfam Domain of unknown function (DUF3403) 1599 1643 IPR021820 GO:0004674
Pumo2g02173 1643 Pfam Protein tyrosine and serine/threonine kinase 1327 1595 IPR001245 GO:0004672|GO:0006468
Pumo2g02173 1643 Pfam Protein tyrosine and serine/threonine kinase 507 775 IPR001245 GO:0004672|GO:0006468
Pumo2g02173 1643 CDD STKc_IRAK 512 777 - -
Pumo2g02173 1643 FunFam Os04g0303100 protein 884 1032 - -
Pumo2g02173 1643 CDD STKc_IRAK 1332 1598 - -
Pumo2g02173 1643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Pumo2g02173 1643 CDD PAN_AP_plant 1167 1246 - -
Pumo2g02173 1643 Gene3D Hepatocyte Growth Factor 1163 1247 - -
Pumo2g02173 1643 Gene3D Hepatocyte Growth Factor 343 427 - -
Pumo2g02173 1643 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 827 1588 - -
Pumo2g02173 1643 Pfam PAN-like domain 1164 1232 IPR003609 -
Pumo2g02173 1643 Pfam PAN-like domain 344 412 IPR003609 -
Pumo2g02173 1643 Pfam S-locus glycoprotein domain 1033 1143 IPR000858 GO:0048544
Pumo2g02173 1643 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Pumo2g02173 1643 Gene3D Transferase(Phosphotransferase) domain 1 1402 1610 - -
Pumo2g02173 1643 Gene3D Transferase(Phosphotransferase) domain 1 582 787 - -
Pumo2g02173 1643 Gene3D Phosphorylase Kinase; domain 1 1290 1401 - -
Pumo2g02173 1643 Gene3D Phosphorylase Kinase; domain 1 464 581 - -
Pumo2g02173 1643 FunFam Os04g0303100 protein 67 212 - -
Pumo2g02173 1643 ProSiteProfiles Protein kinase domain profile. 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02173 1643 SUPERFAMILY alpha-D-mannose-specific plant lectins 894 1006 IPR036426 -
Pumo2g02173 1643 CDD B_lectin 856 975 IPR001480 -
Pumo2g02173 1643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1447 1459 IPR008271 GO:0004672|GO:0006468
Pumo2g02173 1643 ProSiteProfiles EGF-like domain profile. 1109 1145 IPR000742 -
Pumo2g02173 1643 CDD B_lectin 38 155 IPR001480 -
Pumo2g02173 1643 ProSiteProfiles Protein kinase domain profile. 1326 1603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02173 1643 SMART egf_5 292 337 IPR000742 -
Pumo2g02173 1643 SMART egf_5 1112 1157 IPR000742 -
Pumo2g02173 1643 SUPERFAMILY Protein kinase-like (PK-like) 489 799 IPR011009 -
Pumo2g02173 1643 ProSiteProfiles PAN/Apple domain profile. 344 426 IPR003609 -
Pumo2g02173 1643 SUPERFAMILY Protein kinase-like (PK-like) 1309 1618 IPR011009 -
Pumo2g02173 1643 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1402 1605 - -
Pumo2g02173 1643 Gene3D - 20 152 IPR036426 -
Pumo2g02173 1643 Gene3D - 838 972 IPR036426 -
Pumo2g02173 1643 SMART serkin_6 1326 1597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02173 1643 SMART serkin_6 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02173 1643 Pfam D-mannose binding lectin 74 181 IPR001480 -
Pumo2g02173 1643 Pfam D-mannose binding lectin 893 1001 IPR001480 -
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 470 581 - -
Pumo2g02173 1643 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 186 IPR036426 -
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1290 1401 - -
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
Pumo2g02173 1643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 840 972 - -
Pumo2g02173 1643 ProSiteProfiles PAN/Apple domain profile. 1164 1246 IPR003609 -
Pumo2g02173 1643 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02173 Pumo-Chr2 45224338 45242853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02173 432 794 Receptor kinase-like Gene Family AT4G23230 52.473 2.39e-119 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g02173 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02173 - - tpra:123915292 2220.66