Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02169 ATGAACCAAACTCTCTATCTTCGTCACCGCCTTACTTGGATCCCCGAGGCCGAAGCTTGGAGCATTTACCAATCCTTGCCGCGAGATAGTTGTGACGTGTATAACACTTGTGGGTCCAATGGAATTTGTGTGATTGCTGGGTCGCCGATTTGCGAGTGCTTGGATGGGTTCGAGCCGAAATCGCCCCTGCAGTGGAACGCGATGGACTGGAGAGAAGGATGTGTGCGTAGTGAAGAGTGGAAATGTGGGGTGAAAAATAAAGATGGTTTTCGAAGATTTGCTGGTATGAAATTGCCAAATACTACATTTTCTTGGGTTAATGAAAGTATGACACTTGAGGAGTGTAGGGCCAAATGCTTGGAAAATTGTTCGTGCAAGGCTTATTCGAACTTGGACACGAGGGGAGGAGGTAGTGGGTGCTCTATTTGGGTTGGTGAGCTTGTTGATTTGAGAGTTATAGAAAGTGGGCAAGATTTGTATGTTCGAATGGCCACTTCGGATACAGCAGATGGTAAACATGGAGAACGGAAAAAGGTAATCGTGGCGGTTTCAGTCACAGCATCGTTGGTGCTTGTGATGTTATTAGCATTTTGCATTTACATCACAAAAAGAAAATATAAAGGGAAAACGAAAACAAGAATGTTGACAGAAGATAAAGATGGAGGCAGACAAGAAGATTTGGAGCTTCCTTTCTTTGATCTTGCTACAATAGTTAATGCTACTAATAATTTTTCAATTGAGAATAAGCTCGGTGAAGGTGGTTTTGGTCCTGTATACAAGGGTATTTTAGTAGATGGACAAGAAATTGCAATCAAAAGGCTTTCACGAAGTTCAGGACAAGGATTAAAAGAATTTAGAAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTCAAGGTTTTGGGTTATTGCATTCAAGGAGAAGAGAAAATGTTACTCTATGAATACATGCCCAACAAAAGTCTCGATTTATTTCTTTTTGATTCGGAGCAAAGTAAATTTTTAAATTGGCCACTGCGCTTTAACATTTTGAATGCGATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTAAAGGCAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCCTTGCAAGAATGTGTGGAAGCGATCAAGTTGAAGGGAGTACAAGTATCATAGTTGGGACACATGGTTACATGGCACCTGAATATGCCATTGATGGACTATTCTCAACAAAATCGGATGTGTTTAGCTTTGGAGTGTTATTGCTAGAAATTGTTAGTGGAAAGAAAAGCAGAGCATTTACCTACCAAGACAACAATCATAATCTTATTGATCATGCATGGAGATTGTGGAAAGAAGGTACTCCAGAGCAATTGATTGATGCACATTTGGCAAACTCGTGTAATATATTTGAAGTTATACGGTGCATTCAAATTAGTCTTCTATGTCTACAACATCATCCAGACGATAGGCCGAACATGACATCAGTTGTTGTGATGTTGACCAGTGAAAATGCTTTACAAGAACCTAAGGAGCCTGGTTTCTTAATTAGAAGGGTTTCAAATGAAGGAGAACAATCTTCTAATAGACAAACATCTTCTTCAATCAATGAAGTATCTATCTCACTTTTAAATGCTAGATAA 1686 0.3915 MNQTLYLRHRLTWIPEAEAWSIYQSLPRDSCDVYNTCGSNGICVIAGSPICECLDGFEPKSPLQWNAMDWREGCVRSEEWKCGVKNKDGFRRFAGMKLPNTTFSWVNESMTLEECRAKCLENCSCKAYSNLDTRGGGSGCSIWVGELVDLRVIESGQDLYVRMATSDTADGKHGERKKVIVAVSVTASLVLVMLLAFCIYITKRKYKGKTKTRMLTEDKDGGRQEDLELPFFDLATIVNATNNFSIENKLGEGGFGPVYKGILVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVLGYCIQGEEKMLLYEYMPNKSLDLFLFDSEQSKFLNWPLRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGKKSRAFTYQDNNHNLIDHAWRLWKEGTPEQLIDAHLANSCNIFEVIRCIQISLLCLQHHPDDRPNMTSVVVMLTSENALQEPKEPGFLIRRVSNEGEQSSNRQTSSSINEVSISLLNAR 561
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02169 561 SMART serkin_6 244 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02169 561 CDD PAN_AP_plant 85 164 - -
Pumo2g02169 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Pumo2g02169 561 Gene3D Hepatocyte Growth Factor 81 165 - -
Pumo2g02169 561 ProSiteProfiles Protein kinase domain profile. 244 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02169 561 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 541 - -
Pumo2g02169 561 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 208 319 - -
Pumo2g02169 561 Pfam PAN-like domain 82 150 IPR003609 -
Pumo2g02169 561 Pfam Protein tyrosine and serine/threonine kinase 245 513 IPR001245 GO:0004672|GO:0006468
Pumo2g02169 561 Pfam S-locus glycoprotein domain 9 61 IPR000858 GO:0048544
Pumo2g02169 561 CDD STKc_IRAK 250 516 - -
Pumo2g02169 561 SMART ntp_6 85 163 IPR003609 -
Pumo2g02169 561 Gene3D Phosphorylase Kinase; domain 1 205 319 - -
Pumo2g02169 561 Pfam Domain of unknown function (DUF3403) 517 561 IPR021820 GO:0004674
Pumo2g02169 561 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 320 523 - -
Pumo2g02169 561 ProSiteProfiles PAN/Apple domain profile. 82 164 IPR003609 -
Pumo2g02169 561 Gene3D Transferase(Phosphotransferase) domain 1 320 528 - -
Pumo2g02169 561 ProSiteProfiles EGF-like domain profile. 27 63 IPR000742 -
Pumo2g02169 561 SUPERFAMILY Protein kinase-like (PK-like) 227 536 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo2g02169 Pumo-Chr2 45153593 45156163 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02169 165 532 Receptor kinase-like Gene Family AT4G23230 52.575 1.99e-128 387
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g02169 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02169 - - gmx:100776310 1041.57