Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g02169 | ATGAACCAAACTCTCTATCTTCGTCACCGCCTTACTTGGATCCCCGAGGCCGAAGCTTGGAGCATTTACCAATCCTTGCCGCGAGATAGTTGTGACGTGTATAACACTTGTGGGTCCAATGGAATTTGTGTGATTGCTGGGTCGCCGATTTGCGAGTGCTTGGATGGGTTCGAGCCGAAATCGCCCCTGCAGTGGAACGCGATGGACTGGAGAGAAGGATGTGTGCGTAGTGAAGAGTGGAAATGTGGGGTGAAAAATAAAGATGGTTTTCGAAGATTTGCTGGTATGAAATTGCCAAATACTACATTTTCTTGGGTTAATGAAAGTATGACACTTGAGGAGTGTAGGGCCAAATGCTTGGAAAATTGTTCGTGCAAGGCTTATTCGAACTTGGACACGAGGGGAGGAGGTAGTGGGTGCTCTATTTGGGTTGGTGAGCTTGTTGATTTGAGAGTTATAGAAAGTGGGCAAGATTTGTATGTTCGAATGGCCACTTCGGATACAGCAGATGGTAAACATGGAGAACGGAAAAAGGTAATCGTGGCGGTTTCAGTCACAGCATCGTTGGTGCTTGTGATGTTATTAGCATTTTGCATTTACATCACAAAAAGAAAATATAAAGGGAAAACGAAAACAAGAATGTTGACAGAAGATAAAGATGGAGGCAGACAAGAAGATTTGGAGCTTCCTTTCTTTGATCTTGCTACAATAGTTAATGCTACTAATAATTTTTCAATTGAGAATAAGCTCGGTGAAGGTGGTTTTGGTCCTGTATACAAGGGTATTTTAGTAGATGGACAAGAAATTGCAATCAAAAGGCTTTCACGAAGTTCAGGACAAGGATTAAAAGAATTTAGAAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTCAAGGTTTTGGGTTATTGCATTCAAGGAGAAGAGAAAATGTTACTCTATGAATACATGCCCAACAAAAGTCTCGATTTATTTCTTTTTGATTCGGAGCAAAGTAAATTTTTAAATTGGCCACTGCGCTTTAACATTTTGAATGCGATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTAAAGGCAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATTTCAGATTTTGGCCTTGCAAGAATGTGTGGAAGCGATCAAGTTGAAGGGAGTACAAGTATCATAGTTGGGACACATGGTTACATGGCACCTGAATATGCCATTGATGGACTATTCTCAACAAAATCGGATGTGTTTAGCTTTGGAGTGTTATTGCTAGAAATTGTTAGTGGAAAGAAAAGCAGAGCATTTACCTACCAAGACAACAATCATAATCTTATTGATCATGCATGGAGATTGTGGAAAGAAGGTACTCCAGAGCAATTGATTGATGCACATTTGGCAAACTCGTGTAATATATTTGAAGTTATACGGTGCATTCAAATTAGTCTTCTATGTCTACAACATCATCCAGACGATAGGCCGAACATGACATCAGTTGTTGTGATGTTGACCAGTGAAAATGCTTTACAAGAACCTAAGGAGCCTGGTTTCTTAATTAGAAGGGTTTCAAATGAAGGAGAACAATCTTCTAATAGACAAACATCTTCTTCAATCAATGAAGTATCTATCTCACTTTTAAATGCTAGATAA | 1686 | 0.3915 | MNQTLYLRHRLTWIPEAEAWSIYQSLPRDSCDVYNTCGSNGICVIAGSPICECLDGFEPKSPLQWNAMDWREGCVRSEEWKCGVKNKDGFRRFAGMKLPNTTFSWVNESMTLEECRAKCLENCSCKAYSNLDTRGGGSGCSIWVGELVDLRVIESGQDLYVRMATSDTADGKHGERKKVIVAVSVTASLVLVMLLAFCIYITKRKYKGKTKTRMLTEDKDGGRQEDLELPFFDLATIVNATNNFSIENKLGEGGFGPVYKGILVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVLGYCIQGEEKMLLYEYMPNKSLDLFLFDSEQSKFLNWPLRFNILNAIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCGSDQVEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGKKSRAFTYQDNNHNLIDHAWRLWKEGTPEQLIDAHLANSCNIFEVIRCIQISLLCLQHHPDDRPNMTSVVVMLTSENALQEPKEPGFLIRRVSNEGEQSSNRQTSSSINEVSISLLNAR | 561 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g02169 | 561 | SMART | serkin_6 | 244 | 515 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g02169 | 561 | CDD | PAN_AP_plant | 85 | 164 | - | - | |
Pumo2g02169 | 561 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 365 | 377 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo2g02169 | 561 | Gene3D | Hepatocyte Growth Factor | 81 | 165 | - | - | |
Pumo2g02169 | 561 | ProSiteProfiles | Protein kinase domain profile. | 244 | 521 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g02169 | 561 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 36 | 541 | - | - | |
Pumo2g02169 | 561 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 208 | 319 | - | - | |
Pumo2g02169 | 561 | Pfam | PAN-like domain | 82 | 150 | IPR003609 | - | |
Pumo2g02169 | 561 | Pfam | Protein tyrosine and serine/threonine kinase | 245 | 513 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo2g02169 | 561 | Pfam | S-locus glycoprotein domain | 9 | 61 | IPR000858 | GO:0048544 | |
Pumo2g02169 | 561 | CDD | STKc_IRAK | 250 | 516 | - | - | |
Pumo2g02169 | 561 | SMART | ntp_6 | 85 | 163 | IPR003609 | - | |
Pumo2g02169 | 561 | Gene3D | Phosphorylase Kinase; domain 1 | 205 | 319 | - | - | |
Pumo2g02169 | 561 | Pfam | Domain of unknown function (DUF3403) | 517 | 561 | IPR021820 | GO:0004674 | |
Pumo2g02169 | 561 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 320 | 523 | - | - | |
Pumo2g02169 | 561 | ProSiteProfiles | PAN/Apple domain profile. | 82 | 164 | IPR003609 | - | |
Pumo2g02169 | 561 | Gene3D | Transferase(Phosphotransferase) domain 1 | 320 | 528 | - | - | |
Pumo2g02169 | 561 | ProSiteProfiles | EGF-like domain profile. | 27 | 63 | IPR000742 | - | |
Pumo2g02169 | 561 | SUPERFAMILY | Protein kinase-like (PK-like) | 227 | 536 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g02169 | Pumo-Chr2 | 45153593 | 45156163 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g02169 | 165 | 532 | Receptor kinase-like Gene Family | AT4G23230 | 52.575 | 1.99e-128 | 387 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo2g02169 | PK_Tyr_Ser-Thr | 2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g02169 | - | - | gmx:100776310 | 1041.57 |