Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02161 ATGCGGTTAAGGCGGCGGCGGCGGCGGCGAAGGAGGAGAGGGTTCGAAACGAAGCCGCCTCCGTTTCGGCAGAGGCTTCTGGTGGTGGCCAACAGGCTGCCGGTGTCGGCGGTGAGGAAAGGGGAGGACGCGTGGTCGTTGGAGATAAGTGCCGGTGGCCTCGTCAGCGCGCTGTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGAGTGAACGTACCAGATGAGATTGGACAGAAGGCACTTACTAAAGCCTTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTGATGAAGAGATTGTTCATCAATATTACAATGGCTATTGCAACAACATATTGTGGCCCCTTTTCCACTACCTTGGACTTCCACAAGAGGACCGCCTTGCCACCACACGCAGTTTTCAGTCTCAGTTTGAGGCATACGAGAAAGCAAATCAGATGTTTGCTGATGTTGTCAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCCAAATGCTTGAAGAAACATAACAAGAAAATGAAAGTTGGATGGTTTCTCCACACCCCTTTTCCATCTTCTGAAATTCACAGGACACTGCCGTCTCGTTCGGAGCTCCTGCATTCCGTTCTTGCTGCTGATTTAGTTGGTTTTCACACCTACGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAAGGTACACCTTATGGGGTTGAATATCAAGGGAAGCTAACTCGAGTTGCCGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCTCTTGACCTTCCTCCAGTACAAGAACACATCAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAAACTGCTTATTGGCGTGA 981 0.4669 MRLRRRRRRRRRRGFETKPPPFRQRLLVVANRLPVSAVRKGEDAWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKKHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENCLLA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02161 326 Pfam Glycosyltransferase family 20 25 322 IPR001830 GO:0003824|GO:0005992
Pumo2g02161 326 Gene3D Glycogen Phosphorylase B; 272 325 - -
Pumo2g02161 326 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 17 322 IPR001830 GO:0003824|GO:0005992
Pumo2g02161 326 CDD GT20_TPS 25 322 IPR001830 GO:0003824|GO:0005992
Pumo2g02161 326 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 17 271 - -
Pumo2g02161 326 Gene3D Glycogen Phosphorylase B; 19 271 - -
Pumo2g02161 326 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 24 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02161 Pumo-Chr2 44825628 44831100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02161 20 323 Trehalose Biosynthesis Gene Families AT1G78580 91.447 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02161 K16055 - gmx:100797320 617.076