Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02160 ATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAGTCTCTTGGTGCTGGCGCAATTCTTGTCAACCCCTGGAACATTACAGAAGTTGCTGCTGCAATTGCCAGGGCTCTGAACATGCCATCTGGAGAAAGAGAAAAGAGACATAAGCATAATTTTTTTCATGTAAAATCCCACACTGCTCAAGAATGGGCTGGAACTTTCGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCGCCTCGGCTTCCAACCAAGACTGCAATTGAACGTTATCAGCAGTCAACTAATAGATTGCTCATTTTGGGATTCAGTGGAACTTTAACTGAACCAGTCGAGAAAACAGGTGATCAAATTAAAGAAATGGAACTAAAGGTGCATCCAAAATTGAGACAACCCTTGACAGCACTATGCAGTGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGCGGTAGACAAGTCCTAGATGATAACTTCAAAGAATATGACATGTGGTTGGCAGCTGAGAATGGAATGTTTTTACATCCTTCAAAGGGTGAGTGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTCGATAGTGTAAAGCATGTTTTTGAGTACTTCACGGAAAGAACTCCTCGGTCACATTTTAATTTTGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATATTCAGGTGCTTACATTGTTCTTATGGAGATTTTCGTGTTTCCGGCTGTCTTTTTGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCGGTTGAAGTTGTTCAAGGGAGCCGATCCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCTTGGGCGAGATAGTGCACAGTAAAACCATGACATCACCAATTGATTATGTTCTTTGCATAGGACATTTTCTGGGGAAGGATGAAGATCTTTATTCATTTTTTGAGCCGGATCTTCCCTCTATTGGTGTGGGTCTTCCACGAAGCAAGGTAACAACAGATGGAGTCAAGTTTCCTGTTGAAAGAAAACCAACTTTGAAGGTCCCAGCTACTAAGAGTGGACCAAAGTCATCTCAAAATAAGGCACAACGAGCGGTGTCAAATTCTGAGAAGAAAACAAATAACCATATATGCAATTCACCACGAAGGCCAGCAGCACCTGAAAAGGTTTCATGGAACGTCCTTGACCTTAAGAAAGAGAATTACTTCTCTTGCGCTATTGGCCGAACAAGAACCAATGCTCGGTATATACTCGATTCATCGGACGACGTCGTTTCGCTTCTGAAGGAACTAGCAGGTGCTTCTTCCAGCCTTCACCACTGA 1443 0.4276 MNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIARALNMPSGEREKRHKHNFFHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPRLPTKTAIERYQQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCSDPNTTVVVLSGSGRQVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFNFEERETSLVWNYKYSGAYIVLMEIFVFPAVFLMLSLENFKQGTCCSISGQVQFLMHRLKLFKGADPVEVRAVGVTKGAAIDRILGEIVHSKTMTSPIDYVLCIGHFLGKDEDLYSFFEPDLPSIGVGLPRSKVTTDGVKFPVERKPTLKVPATKSGPKSSQNKAQRAVSNSEKKTNNHICNSPRRPAAPEKVSWNVLDLKKENYFSCAIGRTRTNARYILDSSDDVVSLLKELAGASSSLHH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02160 480 Pfam Trehalose-phosphatase 295 368 IPR003337 GO:0003824|GO:0005992
Pumo2g02160 480 Pfam Trehalose-phosphatase 143 252 IPR003337 GO:0003824|GO:0005992
Pumo2g02160 480 Pfam Glycosyltransferase family 20 1 89 IPR001830 GO:0003824|GO:0005992
Pumo2g02160 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 91 - -
Pumo2g02160 480 FunFam Alpha,alpha-trehalose-phosphate synthase 145 216 - -
Pumo2g02160 480 SUPERFAMILY HAD-like 121 472 IPR036412 -
Pumo2g02160 480 MobiDBLite consensus disorder prediction 391 420 - -
Pumo2g02160 480 MobiDBLite consensus disorder prediction 387 425 - -
Pumo2g02160 480 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 472 IPR001830 GO:0003824|GO:0005992
Pumo2g02160 480 Gene3D - 211 310 - -
Pumo2g02160 480 Gene3D Glycogen Phosphorylase B; 75 86 - -
Pumo2g02160 480 Gene3D - 125 365 IPR023214 -
Pumo2g02160 480 Gene3D Glycogen Phosphorylase B; 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02160 Pumo-Chr2 44817425 44823286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02160 1 477 Trehalose Biosynthesis Gene Families AT1G78580 63.821 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02160 K16055 - gmx:100797320 809.29