Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02137 ATGGGAAGGTGCATGTCACATATTGTTTTGCCTTTTGCATATGTTGCCGCAGTCTGTGTCTTCAGCTGCTTGGTTAACGTTGCACAAGCTCAAGCCCCAAACGCCACCACAGATCCTTCTGAAGCAAGAGCTTTAAATGCAATCTTCAGCAAATGGCACATATCGGCAGACACAACTAAATGGAATATCAGCGCCGAACTGTGCAGTGGAGGAGCCATCGACGATACCATCACTGTTGAAGATTTTGACCCATTCATCAAGTGTGATTGTTCCTATGACAGTAAAACTACTTGCCACATCATAGCACTGAAGGTTTATGCATTAAATGTGATTGGTGAAATTCCAGAAGAGCTATGGACTCTTACTTACCTCATCAGTTTAAATCTTGCCCAGAATTACTTGACGGGTTCTCTACCTCCAGCCATTGGAAATCTATTTCGTATGCAATACTTGACCGTTAGTATCAATAATTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTAAAATCACTGAGTTTTTCGTCAAACAAGTTCTCAGGATCTCTCCCATCTGAACTTGGGAAATTGATAGAGTTAGAACAACTCTACATTGATAGTTCAGGAATTAGTGGTCCAATTCCTTCCACATTTGCAAACCTTAGGAATTTAGTGACAGTGAGGTTTCAGGGCAATTCTTTTAATGGCTCAATACCCTCCTCATTTTCCAATTTGACTTCTTTGAAAGAATTGAGAATAAGTGGTTTGTCTAATGGGAGCTCCCCACTGGAATTTGTAAGGAATATGAAATCTTTGACTATCTTAGAACTGAGGAATAACAATGTTTCTGGTTCAATTCCATCCACCATTGGAGACTTTCAAAATTTGACTCAGCTGGATTTAAGCTTCAATAACATCACAGGACAAATTCTGGGATCAATTTTCAATTTGAGTTCGCTTTCTTACTTATTTCTTGGAAATAACAAACTTAGTGGCACCCTCCCAATACAGAAAAGTTCATCTCTTCAAAATATAGACTTGTTGTACAATGATCTATCAGGCAGCCTCCCCTCTTGGGTAAATGAACCAAATTTACAATTGAATTTGGTTGCCAACAACTTGACAATAGACCGTTCAAATACCAGTGGCTTGCCTACTGAGCTCAACTGTCTTCAGAAAAATTTTCCTTGCAATCGTGGTGATGGAAGATATTCTAACTTTGCAATCAAGTGTGGTGGTCCCCAAATTACGTCAGTAGATGGAATTGTGTATGAAATGGACAATGCGACACTTGGTCCTGCTACATACGCTGTTACTAGTACAAATAGATGGGCTATTAGTAATGTTGGATTATTTATGGGGAGCAGTAATCCTATATTCAAACGTATTGTGTCTAATCAGTTCACTGGTACTGTGAACTCGCAGCTCTTCCAAACAGCAAGGCTATCTGCTTCATCATTAAGATATTATGGCTTGGGGCTAGAAAATGGCTTTTACAACATCACCCTTCAATTTGCAGAAATAGCTATTCAGGATTCTACTACATGGGAAAGCCTTGGGAGGCGGGTCTTTGATATTTATATTCAGGGGATTCTTGTATTGAAGGATTTTGACATACAAAAGGAAGCTGGGGGCTTTTCATACAATGTTGTCCAAAAGAAATTTAGGTTTGAAGTGTCAGAAAACTATCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGTTGCATACCAGATCCAAGTACTTATGGGCCCTTGATTCAAGCCATCCATGCTATCCCAGATTTCATACCTAGTGTCAGTAATGAACTTCCGAGCAATAAAAATAATAGAAGCGGACTAATCGTTGGAATTGTTATTGGAATTGGAGTTGTATTCTTTATATCAATTTTTGCGATTTTTTGTATCATTCAGAGAAGAAAACGCCATGAAGATGATGAAGAGCTTTTAGGAATTGATACAAAGCCATATACTTTTAGCTATTCTGAGTTAAAGAACGCTACAAATGACTTTAATCTTGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGAGCTATTGATGTAAAACAACTATCAGTAGGATCGCATCAAGGAAAGAGCCAATTCATAACTGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTGGTCAAATTATATGGATGTTGCTTTAAGGGGAGTAAAAAACTTCTTGTCTATGAGTATCTAGAAAATAAGAGTCTTGACCAAGCTTTATTTGGAAACTGTTTAATCTTGAATTGGTCCACACGCTATGATATTTGCTTGGGTATTGCTAAAGGTTTAACTTATTTACATGAAGAGTCACGTCTTCGTATTGTACACCGTGATGTGAAGGCTAGCAATATTTTGCTTGATTATGAGCTTATCCCCAAAATATCTGATTTTGGTTTGGCCAAATTGTATGATGATAAAAAGACACATATAAGCACTGGTGTGGCTGGGACAATTGGATATCTTGCACCAGAATATGCCATGCGTGGACACCTTACAGAGAAAGCAGATGTCTTTTCCTTTGGTGTTGTGGCTCTAGAGATAGTTAGTGGGAGACCAAATTCTAATTCAAGTTTGGAAGGAGAAAAGGTGTATCTTCTAGAATGGGCATGGCAACTTCATGAAAGCAACCACATAACTGATTTGGTGGATCCTAGACTTTCAGAATTCAACAAGGAAGAAGTAAAACGCGTTGTAGGAATAGCACTTTTGTGCACTCAGACATCACCAGCAATACGACCATCAATGTCACGTGTGGTGGCTATGCTTTCAGGAGATATTGAAGTTAGCATTGTAACTACAAAGCCTGGATACTTGACTGATTGGAAATTTGAGGATGTAACCAGTTTGATGAGTAACATTACAATTAAAGGATCATATACAAGTTATGATAATTCATCAGCAAGTACCAACACAATGGCTAGTGTCGACCAATCGCCAATAAGTCCTTCTAATCCAATCCTTAATAAGACTTTCGGCGAGGGTTGGTAA 3027 0.3869 MGRCMSHIVLPFAYVAAVCVFSCLVNVAQAQAPNATTDPSEARALNAIFSKWHISADTTKWNISAELCSGGAIDDTITVEDFDPFIKCDCSYDSKTTCHIIALKVYALNVIGEIPEELWTLTYLISLNLAQNYLTGSLPPAIGNLFRMQYLTVSINNLSGELPKELGNLTELKSLSFSSNKFSGSLPSELGKLIELEQLYIDSSGISGPIPSTFANLRNLVTVRFQGNSFNGSIPSSFSNLTSLKELRISGLSNGSSPLEFVRNMKSLTILELRNNNVSGSIPSTIGDFQNLTQLDLSFNNITGQILGSIFNLSSLSYLFLGNNKLSGTLPIQKSSSLQNIDLLYNDLSGSLPSWVNEPNLQLNLVANNLTIDRSNTSGLPTELNCLQKNFPCNRGDGRYSNFAIKCGGPQITSVDGIVYEMDNATLGPATYAVTSTNRWAISNVGLFMGSSNPIFKRIVSNQFTGTVNSQLFQTARLSASSLRYYGLGLENGFYNITLQFAEIAIQDSTTWESLGRRVFDIYIQGILVLKDFDIQKEAGGFSYNVVQKKFRFEVSENYLEIHLFWAGKGTCCIPDPSTYGPLIQAIHAIPDFIPSVSNELPSNKNNRSGLIVGIVIGIGVVFFISIFAIFCIIQRRKRHEDDEELLGIDTKPYTFSYSELKNATNDFNLENKLGEGGFGPVYKGTLNDGRAIDVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCFKGSKKLLVYEYLENKSLDQALFGNCLILNWSTRYDICLGIAKGLTYLHEESRLRIVHRDVKASNILLDYELIPKISDFGLAKLYDDKKTHISTGVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSNSSLEGEKVYLLEWAWQLHESNHITDLVDPRLSEFNKEEVKRVVGIALLCTQTSPAIRPSMSRVVAMLSGDIEVSIVTTKPGYLTDWKFEDVTSLMSNITIKGSYTSYDNSSASTNTMASVDQSPISPSNPILNKTFGEGW 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02137 1008 Gene3D - 401 591 - -
Pumo2g02137 1008 SMART serkin_6 668 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02137 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 255 378 - -
Pumo2g02137 1008 Gene3D Ribonuclease Inhibitor 38 255 IPR032675 -
Pumo2g02137 1008 CDD STKc_IRAK 674 935 - -
Pumo2g02137 1008 FunFam Leucine-rich repeat receptor protein kinase EMS1 114 211 - -
Pumo2g02137 1008 FunFam Leucine-rich repeat receptor-like protein kinase 400 591 - -
Pumo2g02137 1008 SUPERFAMILY L domain-like 90 371 - -
Pumo2g02137 1008 Gene3D Ribonuclease Inhibitor 256 378 IPR032675 -
Pumo2g02137 1008 SUPERFAMILY Protein kinase-like (PK-like) 651 965 IPR011009 -
Pumo2g02137 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 962 - -
Pumo2g02137 1008 Gene3D Phosphorylase Kinase; domain 1 630 743 - -
Pumo2g02137 1008 Gene3D Transferase(Phosphotransferase) domain 1 744 945 - -
Pumo2g02137 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 947 - -
Pumo2g02137 1008 Pfam Protein tyrosine and serine/threonine kinase 669 935 IPR001245 GO:0004672|GO:0006468
Pumo2g02137 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Pumo2g02137 1008 ProSiteProfiles Protein kinase domain profile. 668 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02137 1008 Pfam Malectin domain 402 587 IPR021720 -
Pumo2g02137 1008 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Pumo2g02137 1008 FunFam Leucine-rich repeat receptor-like protein kinase 637 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02137 Pumo-Chr2 44145504 44183896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02137 100 254 Receptor kinase-like Gene Family AT1G56120 25.806 2.74e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g02137 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02137 - - gmx:100798233 1617.82