Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02095 ATGCCAGATTTGGGGAACCTATCACTCTCTGCGACTCTCACACTCTCTCACTGCTCCTCCGATGTCCCTGACGCTCCCGTCAAAACCCTACCCAATAATGGCTTCGCTTCCGAGCCTGCCTTCGAGCCTCGCGTTTTGAAGCGCACCCGCGGCTCCGTGGATCGGGTCAAGAAGCCCGCCGCTGACAAGACCTTCCAGGATCGCCTCAAAGATGCCTTCTCTCTTCCTTTTCTTGTTGGCGCTCCCAAGATGGATGAATGTTGTTTTTGCCGCCATTTTATCTACCCTGGGGTGGAGCTCTTGTGTTCTGTTCGCGGATGTGATGCACGCTACCATTCCGAATGTGCAAGAGAAGCTGTCGGGGCTTCCAGTCTGAAAAAATTCAAGTGTCCACAGCATGTATGCTTCATTTGCAAGCAAAAGAAGCAGTTGAGGTGTGTTCGGTGTAAAATAGCATTCCATAGTAAATGTGCACCATGGTCAGATGCAGTGTTGCATCTAAAAGATCATCCTGGGCAAGTTGTTTGCTGGAGGCATCCTTCTGATTGGCGCCTAGATAGAAAGCCTGATGCTTCAACATGTGACATTTCGGAAGTATTTTGTCGCTTGCCTCTTCCATTTATCAGTGAGGAGTTTAAGATTGACTCCACTTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTACACATAAGACGCAATATATACTTAGTAAAGAAGAAACGTAGTGATGTGGATGATGGTGCAGGGTGCACCAGTTGCAGTTCTACATGTTCTGATGATTGTGTTTGCAGGGTTCAATGCATAAGCTGCTCAAAGGCATGTCGCTGCTCAGAAAATTGCAATAATCGACCATTTCGCAAGGAGAAAAAGATCAAGATTGTCAAGACTGAACTTTGTGGATGGGGAGTGGAGGCCGCTGAAACAATCGATAAAGGTGGATTTATAATTGAGTATATTGGAGAAGTCATTGACGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACAGGGGTGTACAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGATCCCAACTGTGTTTTGGAGAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTGTTTGCTGCTCGTTCGATAGAAGCTGGAGAGCCGTTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTCAAATGCCACTGTGGTGCAGCAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATTGGCAAGCTAGACCTCTGTTGGGGTTCAAAACGTAAGCGAACATCAAATGCTTGCATTACGTTAGTAACAGCTGTATGA 1389 0.455 MPDLGNLSLSATLTLSHCSSDVPDAPVKTLPNNGFASEPAFEPRVLKRTRGSVDRVKKPAADKTFQDRLKDAFSLPFLVGAPKMDECCFCRHFIYPGVELLCSVRGCDARYHSECAREAVGASSLKKFKCPQHVCFICKQKKQLRCVRCKIAFHSKCAPWSDAVLHLKDHPGQVVCWRHPSDWRLDRKPDASTCDISEVFCRLPLPFISEEFKIDSTWKDMDSKMEQPPPYVHIRRNIYLVKKKRSDVDDGAGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKEKKIKIVKTELCGWGVEAAETIDKGGFIIEYIGEVIDDALCEKRLWDMKYRGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEAGEPLTYDYRFVQFGPEVKCHCGAANCQGFLGTKKKIGKLDLCWGSKRKRTSNACITLVTAV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02095 462 PANTHER SET DOMAIN PROTEINS 60 450 - -
Pumo2g02095 462 SMART PostSET_3 416 432 IPR003616 -
Pumo2g02095 462 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 461 IPR025787 -
Pumo2g02095 462 ProSiteProfiles SET domain profile. 293 410 IPR001214 GO:0005515
Pumo2g02095 462 Pfam SET domain 304 409 IPR001214 GO:0005515
Pumo2g02095 462 SMART PHD_3 135 180 IPR001965 -
Pumo2g02095 462 SMART PHD_3 86 134 IPR001965 -
Pumo2g02095 462 ProSiteProfiles Post-SET domain profile. 416 432 IPR003616 -
Pumo2g02095 462 ProSiteProfiles AWS domain profile. 250 293 IPR006560 GO:0005634|GO:0042054
Pumo2g02095 462 SUPERFAMILY SET domain 211 422 IPR046341 -
Pumo2g02095 462 Gene3D SET domain 204 447 IPR046341 -
Pumo2g02095 462 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 182 IPR013083 -
Pumo2g02095 462 SMART set_7 293 416 IPR001214 GO:0005515
Pumo2g02095 462 CDD SET_ASHR3-like 294 432 - -
Pumo2g02095 462 FunFam Histone-lysine N-methyltransferase 207 442 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02095 274 431 C2H2 Transcription Factor Family AT2G23740 37.989 5.28e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo2g02095 SET 7.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02095 - - gmx:100791481 853.203